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  1. PombertLab/ID16S PombertLab/ID16S Public

    This pipeline reconstructs the composition of species from 16S amplicon sequencing datasets.

    Perl 1

  2. PombertLab/SSRG PombertLab/SSRG Public

    The SSRG pipeline was created as a simple and focused tool to investigate genetic diversity between genomes.

    Perl 4 4

  3. PombertLab/3DFI PombertLab/3DFI Public

    The 3DFI pipeline predicts the 3D structure of proteins and searches for structural homology in the 3D space.

    Perl 18 7

  4. PombertLab/A2GB PombertLab/A2GB Public

    A2GB is a pipeline that will transform the genome annotation files exported from Apollo in preparation for sequence submission to NCBI’s GenBank.

    Perl 3

  5. PombertLab/MMH PombertLab/MMH Public

    A simple pipeline to create and search HMM models against reference protein databases.

    Perl 1

  6. PombertLab/Publication_scripts PombertLab/Publication_scripts Public

    This repository contains scripts from published or submitted manuscripts.

    Perl 3 3