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Use const pointer to input segmentations #502

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Merged
merged 1 commit into from
Jul 5, 2024
Merged

Use const pointer to input segmentations #502

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4 changes: 2 additions & 2 deletions apps/seg/itkimage2segimage.cxx
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Original file line number Diff line number Diff line change
Expand Up @@ -28,7 +28,7 @@ int main(int argc, char *argv[])
return EXIT_FAILURE;
}

vector<ShortImageType::Pointer> segmentations;
vector<ShortImageType::ConstPointer> segmentations;

for(size_t segFileNumber=0; segFileNumber<segImageFiles.size(); segFileNumber++){
ShortReaderType::Pointer reader = ShortReaderType::New();
Expand Down Expand Up @@ -98,7 +98,7 @@ int main(int argc, char *argv[])
Json::Value reorderedSegmentAttributes;
vector<int> fileOrder(segImageFiles.size());
fill(fileOrder.begin(), fileOrder.end(), -1);
vector<ShortImageType::Pointer> segmentationsReordered(segImageFiles.size());
vector<ShortImageType::ConstPointer> segmentationsReordered(segImageFiles.size());
for(size_t filePosition=0;filePosition<segImageFiles.size();filePosition++){
for(size_t mappingPosition=0;mappingPosition<segImageFiles.size();mappingPosition++){
string mappingItem = metaRoot["segmentAttributesFileMapping"][static_cast<int>(mappingPosition)].asCString();
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2 changes: 1 addition & 1 deletion include/dcmqi/ConverterBase.h
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Expand Up @@ -299,7 +299,7 @@ namespace dcmqi {

// AF: I could not quickly figure out how to template this function over image type - suggestions are welcomed!
static vector<vector<int> > getSliceMapForSegmentation2DerivationImage(const vector<DcmDataset*> dcmDatasets,
const ShortImageType::Pointer &labelImage) {
const ShortImageType::ConstPointer &labelImage) {
// Find mapping from the segmentation slice number to the derivation image
// Assume that orientation of the segmentation is the same as the source series
unsigned numLabelSlices = labelImage->GetLargestPossibleRegion().GetSize()[2];
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2 changes: 1 addition & 1 deletion include/dcmqi/Itk2DicomConverter.h
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Expand Up @@ -63,7 +63,7 @@ namespace dcmqi {
* @return A pointer to the resulting DICOM Segmentation object.
*/
static DcmDataset* itkimage2dcmSegmentation(vector<DcmDataset*> dcmDatasets,
vector<ShortImageType::Pointer> segmentations,
vector<ShortImageType::ConstPointer> segmentations,
const string &metaData,
bool skipEmptySlices=true,
bool useLabelIDAsSegmentNumber=false,
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2 changes: 1 addition & 1 deletion libsrc/Itk2DicomConverter.cpp
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Expand Up @@ -26,7 +26,7 @@ namespace dcmqi {
// -------------------------------------------------------------------------------------

DcmDataset* Itk2DicomConverter::itkimage2dcmSegmentation(vector<DcmDataset*> dcmDatasets,
vector<ShortImageType::Pointer> segmentations,
vector<ShortImageType::ConstPointer> segmentations,
const string &metaData,
bool skipEmptySlices,
bool useLabelIDAsSegmentNumber,
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