Merge branch 'cbroeckl:master' into dev #20
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# This is a basic workflow to help you get started with Actions | |
name: R Conda (with codecov) | |
# Controls when the workflow will run | |
on: | |
# Triggers the workflow on push or pull request events but only for the main branch | |
push: | |
branches: [ master, dev ] | |
pull_request: | |
branches: [ master, dev ] | |
# Allows you to run this workflow manually from the Actions tab | |
workflow_dispatch: | |
# A workflow run is made up of one or more jobs that can run sequentially or in parallel | |
jobs: | |
# This workflow contains a single job called "build" | |
build: | |
strategy: | |
fail-fast: false | |
matrix: | |
os: [ ubuntu-latest, macos-latest] | |
runs-on: ${{ matrix.os }} | |
defaults: | |
run: | |
shell: bash -l {0} | |
# Steps represent a sequence of tasks that will be executed as part of the job | |
steps: | |
# Checks-out your repository under $GITHUB_WORKSPACE, so your job can access it | |
- uses: actions/checkout@v3 | |
- name: Create conda environment | |
uses: conda-incubator/setup-miniconda@v2 | |
with: | |
activate-environment: ramclustr-dev | |
auto-update-conda: true | |
environment-file: conda/environment-dev.yaml | |
auto-activate-base: false | |
- run: | | |
conda init bash | |
conda env list | |
- name: Test coverage | |
run: | | |
conda activate ramclustr-dev | |
Rscript -e "covr::codecov(quiet = FALSE)" |