This repository includes all the submitted RNA structures in RNA-Puzzles.
The RNA Puzzles:
- Puzzle 1: RNA dimer of a regulatory element from human thymidylate synthase mRNA
- Puzzle 2: Self-assembling RNA square
- Puzzle 3: Glycine riboswitch
- Puzzle 4: SAM-I riboswitch aptamer
- Puzzle 5: Lariat capping ribozyme.
- Puzzle 6: Adenosylcobalamin riboswitch
- Puzzle 7: Varkud satellite ribozyme
- Puzzle 8: SAM riboswitch
- Puzzle 9: 5-hydroxytryptophan aptamer
- Puzzle 10: T-box riboswitch and tRNA
- Puzzle 11: 7SK
- Puzzle 12: YdaO riboswitch
- Puzzle 13: ZMP riboswitch
- Puzzle 14: L-glutamine riboswitch (Free)
- Puzzle 14: L-glutamine riboswitch (Bound)
- Puzzle 15: Hammerhead
- Puzzle 16: TBA
- Puzzle 17: Pistol ribozyme
- Puzzle 18: Zika virus
- Puzzle 19: Twister sister
- Puzzle 20: Twister sister
- Puzzle 21: Guanidine III Riboswitch
- Puzzle 24: adenovirus virus-associated RNA
Miao, Zhichao, et al.
"RNA-Puzzles Round III: 3D RNA structure prediction of five riboswitches and one ribozyme."
RNA 23.5 (2017): 655-672.
Miao, Zhichao, et al.
"RNA-Puzzles Round II: assessment of RNA structure prediction programs applied to three large RNA structures."
Rna (2015).
Cruz, José Almeida, et al.
"RNA-Puzzles: a CASP-like evaluation of RNA three-dimensional structure prediction."
Rna 18.4 (2012): 610-625.