Added space after unit in plot

for_local_use.py

@@ -4,21 +4,10 @@
 import numpy as np
 
 if __name__ == '__main__':
+    # Bourbaki
 
-    A, B = BaseSpecies()
-    A + B >> Zero [1]
+    pass
 
-    A(200), B(200)
-    Sim = Simulation(A | B)
-    Sim.level = -1
-    descr = Sim.compile()
-    Sim.plot_data = False
-    Sim.duration = 30 * u.hour
-    Sim.volume = 1*u.m**3
-    Sim.run()
-
-    assert Sim._parameters_for_sbml['volume'][0] > 100
-    assert Sim.fres['Time'][-1] > 100
 
 
 

mobspy/modules/meta_class.py

@@ -19,9 +19,6 @@
 import re
 
 
-
-
-
 # Easter Egg: I finished the first version on a sunday at the BnF in Paris
 # If anyone is reading this, I highly recommend you study there, it is quite a nice place
 class Compiler:

mobspy/modules/meta_class_utils.py

@@ -110,8 +110,8 @@ def create_orthogonal_vector_structure(species):
                 else:
                     simlog.error(f'The same characteristic can only be shared through inheritance. ' +
                                  f'There are two characteristics directly added to two meta-species \n'
-                                f'Repetition in: {spe}, {ref_characteristics_to_object[cha] } \n'
-                                f'Characteristics: {spe.get_characteristics()}, '
+                                 f'Repetition in: {spe}, {ref_characteristics_to_object[cha]} \n'
+                                 f'Characteristics: {spe.get_characteristics()}, '
                                  f'{ref_characteristics_to_object[cha].get_characteristics()} \n')
 
     return ref_characteristics_to_object

mobspy/plot_scripts/default_plots.py

@@ -32,20 +32,20 @@ def set_plot_units(new_plot_params):
     """
     new_plot_params['xlabel'] = 'Time'
     if new_plot_params['unit_x'] is not None:
-        new_plot_params['xlabel'] += f'({new_plot_params["unit_x"]})'
+        new_plot_params['xlabel'] += f' ({new_plot_params["unit_x"]})'
     else:
-        new_plot_params['xlabel'] += '(s)'
+        new_plot_params['xlabel'] += ' (s)'
 
     if new_plot_params['output_concentration']:
         new_plot_params['ylabel'] = 'Conc.'
     else:
         new_plot_params['ylabel'] = 'Counts'
 
     if new_plot_params['unit_y'] is not None:
-        new_plot_params['ylabel'] += f'({new_plot_params["unit_y"]})'
+        new_plot_params['ylabel'] += f' ({new_plot_params["unit_y"]})'
     else:
         if new_plot_params['output_concentration']:
-            new_plot_params['ylabel'] += '(mol/L)'
+            new_plot_params['ylabel'] += ' (mol/L)'
 
 
 def stochastic_plot(species, data, plot_params):

mobspy/simulation.py

@@ -227,8 +227,7 @@ def compile(self, verbose=True):
                              species_counts=self._species_counts,
                              orthogonal_vector_structure=self.orthogonal_vector_structure,
                              volume=self.parameters['volume'],
-                             type_of_model=self.parameters[
-                                 "simulation_method"],
+                             type_of_model=self.parameters["simulation_method"],
                              verbose=verbose,
                              event_dictionary=self.total_packed_events,
                              continuous_sim=self.parameters['_continuous_simulation'],