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added loop modeling chapter + accompanying files #28

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added loop modeling chapter + accompanying files #28

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95c2154
added loop modeling chapter + accompanying files
kathyle9 Dec 24, 2019
7236b1e
Merge branch 'master' into kathy/loop
kathyle9 Mar 11, 2020
9a318bc
Merge branch 'master' of https://github.com/RosettaCommons/PyRosetta.…
kathyle9 Apr 17, 2020
d21dd5a
Added 08.01 GenKIC
kathyle9 Apr 17, 2020
a66a7f1
Added script and pdbs for 8.01
kathyle9 Apr 17, 2020
939926a
Added an additional section in 8.00 to go over how to use function to…
kathyle9 Apr 29, 2020
c530748
Added an additional section in 8.00 to go over how to use function to…
kathyle9 Apr 29, 2020
4998329
Adding an updated GK with a little more modularized sections. Also made
jwillis0720 May 4, 2020
e2d9432
Rename 08.01-Using-Gen-KIC.ipynb to 09.01-Using-Gen-KIC.ipynb
kathyle9 May 5, 2020
9a705f6
Merge pull request #42 from RosettaCommons/jordan-loop
kathyle9 May 5, 2020
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1,035 changes: 1,035 additions & 0 deletions notebooks/08.00-Loop-Modeling.ipynb
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1,420 changes: 1,420 additions & 0 deletions notebooks/09.01-Using-Gen-KIC.ipynb
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469 changes: 469 additions & 0 deletions notebooks/additional_scripts/GenKic.py
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309 changes: 309 additions & 0 deletions notebooks/inputs/2ND2_state1_glyonly.pdb
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274 changes: 274 additions & 0 deletions notebooks/inputs/2ND2_state1_glyonly_loop_removed.pdb
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6,416 changes: 6,416 additions & 0 deletions notebooks/inputs/test_in.frag3
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1,938 changes: 1,938 additions & 0 deletions notebooks/inputs/test_in.pdb
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