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KnetMiner API endpoints
KnetMiner itself is driven under-the-hood by a java REST API (using Spring autowiring), and various API endpoints that generate interactive knetworks (e.g., genepage
) and JSON data (genome
, network
, evidence
, etc. API endpoints).
Further details available here.
Examples:
TODO: require updates to new prod instances.
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Wheat genepage - http://knetminer.rothamsted.ac.uk/wheatknet/genepage?list=MFT
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Rice search - http://knetminer.rothamsted.ac.uk/riceknet/genome?list=ASR3,BADH1 (gene list search)
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Rice - advanced search - http://knetminer.rothamsted.ac.uk/riceknet/genome?keyword=drought+OR+tolerance&list=ASR3,BADH1 (gene list + keyword search)
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Wheat knetwork json - http://knetminer.rothamsted.ac.uk/wheatknet/network?keyword=dormancy&list=MFT
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count keyword hits (wheat) - https://knetminer.rothamsted.ac.uk/wheatknet/countHits?keyword=germination&list=
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Development endpoint, based on cereals (automatically updated daily, not stable)