Fixed functions for interactive barplots

RubenVG02 · Sep 15, 2024 · 50c225f · 50c225f
1 parent 850c4b6
commit 50c225f
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Showing 2 changed files with 5 additions and 2 deletions.
diff --git a/src/barplot_generator.py b/src/barplot_generator.py
@@ -198,4 +198,4 @@ def process_and_plot(bp_path, mf_path, cc_path, output_folder):
 cc_path = 'examples/output/aa/aa.candidates/results_revigo/aa.candidates_0.01_IDs_Pvalues_CC_table.tsv'
 output_folder = 'examples/output/ccc'
 
-process_and_plot(bp_path, mf_path, cc_path, output_folder)
+#process_and_plot(bp_path, mf_path, cc_path, output_folder)
diff --git a/src/revigo_plotting.py b/src/revigo_plotting.py
@@ -10,6 +10,7 @@
 import csv
 from concurrent.futures import ThreadPoolExecutor, as_completed
 from barplot_generator import create_individual_barplot, create_combined_barplot
+from barplot_generator import process_and_plot
 
 tables_paths = {}
 
@@ -185,7 +186,9 @@ def main():
 
     file_dir = os.path.dirname(os.path.abspath(file_path))
 
-    create_combined_barplot(tables_paths, os.path.join(file_dir, 'results_revigo'))
+    #create_combined_barplot(tables_paths, os.path.join(file_dir, 'results_revigo'))
+
+    process_and_plot(tables_paths['BP'], tables_paths['MF'], tables_paths['CC'], os.path.join(file_dir, 'results_revigo'))
 
     print("All files processed.")