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Add default anonymisation config for radiotherapy data #521

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merged 16 commits into from
Jan 8, 2025

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p-j-smith
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Description

Fixes #518

  • add tag operation config for files for RTDOSE, RTPLAN, and RTSTRUCT modalities
  • add test project config for radiotherapy data

Type of change

Please delete options accordingly to the description.

  • Bug fix (non-breaking change which fixes an issue)
  • New feature (non-breaking change which adds functionality)
  • Breaking change (fix or feature that would cause existing functionality to not work as expected)
  • This change requires a documentation update

Suggested Checklist

  • I have performed a self-review of my own code.
  • I have made corresponding changes to the documentation.
  • My changes generate no new warnings.
  • I have commented my code, particularly in hard-to-understand areas.
  • I have passed on my local host device. (see further details at the CONTRIBUTING document)
  • Make sure your branch is up-to-date with main branch. See CONTRIBUTING for a general example to syncronise your branch with the main branch.
  • I have requested review to this PR.
  • I have addressed and marked as resolved all the review comments in my PR.
  • Finally, I have selected squash and merge

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codecov bot commented Oct 30, 2024

Codecov Report

All modified and coverable lines are covered by tests ✅

Project coverage is 87.28%. Comparing base (ecd5abf) to head (04c5223).
Report is 1 commits behind head on main.

Additional details and impacted files
@@           Coverage Diff           @@
##             main     #521   +/-   ##
=======================================
  Coverage   87.28%   87.28%           
=======================================
  Files          76       76           
  Lines        3390     3390           
=======================================
  Hits         2959     2959           
  Misses        431      431           

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@p-j-smith p-j-smith marked this pull request as ready for review January 6, 2025 15:06
@p-j-smith p-j-smith requested a review from stefpiatek January 6, 2025 15:06
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@stefpiatek stefpiatek left a comment

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🎉 looks good, couple of queries on some of the data

projects/configs/tag-operations/rt-plan.yaml Outdated Show resolved Hide resolved
projects/configs/tag-operations/rt-plan.yaml Outdated Show resolved Hide resolved
projects/configs/tag-operations/rt-struct.yaml Outdated Show resolved Hide resolved
@p-j-smith p-j-smith merged commit ae4df7a into main Jan 8, 2025
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@p-j-smith p-j-smith deleted the paul/rt-anon-config branch January 8, 2025 09:43
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Create default anonymisation profile for radiotherapy data
2 participants