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@SCAI-BIO

Fraunhofer SCAI Bioinformatics Department

Deparment of Bioinformatics at Fraunhofer SCAI

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  1. MultiGML MultiGML Public

    MultiGML

    Python 9 4

  2. MultiNODEs MultiNODEs Public

    Python 7 2

  3. STEP STEP Public

    Data and code for STEP (Siamese Twin deep sequence Embedding of Proteins) approach.

    Python 6 3

  4. ExMed-BERT ExMed-BERT Public

    Python 6 1

  5. datastew datastew Public

    Python library for intelligent data stewardship using Large Language Model (LLM) embeddings

    Python 5

  6. EpilepsyOntology EpilepsyOntology Public

    3 1

Repositories

Showing 10 of 43 repositories
  • datastew Public

    Python library for intelligent data stewardship using Large Language Model (LLM) embeddings

    SCAI-BIO/datastew’s past year of commit activity
    Python 5 Apache-2.0 0 10 1 Updated Apr 9, 2025
  • index Public

    Intelligent data steward toolbox using Large Language Model embeddings for automated Data-Harmonization

    SCAI-BIO/index’s past year of commit activity
    TypeScript 3 Apache-2.0 1 11 2 Updated Apr 8, 2025
  • CBM-Comorbidity-KG Public

    a manually curated, comorbidity-centric knowledge graph linking COVID-19 to neurodegenerative diseases

    SCAI-BIO/CBM-Comorbidity-KG’s past year of commit activity
    0 0 0 0 Updated Apr 8, 2025
  • cv-extraction Public

    Web-Tool for LLM based CV extraction

    SCAI-BIO/cv-extraction’s past year of commit activity
    Python 1 Apache-2.0 0 3 3 Updated Apr 7, 2025
  • PD-diagnostic-delay Public

    Parkinson's disease diagnostic delay analysis

    SCAI-BIO/PD-diagnostic-delay’s past year of commit activity
    0 0 0 0 Updated Mar 31, 2025
  • radar-ad-rmt-analysis Public
    SCAI-BIO/radar-ad-rmt-analysis’s past year of commit activity
    Python 0 0 0 0 Updated Mar 26, 2025
  • ollama-docker Public

    Pre-build docker containers for different LLMs using Ollama

    SCAI-BIO/ollama-docker’s past year of commit activity
    Shell 1 Apache-2.0 0 0 0 Updated Mar 24, 2025
  • PDataViewer Public

    Parkinsons Disease cohort landscape visualization

    SCAI-BIO/PDataViewer’s past year of commit activity
    TypeScript 3 Apache-2.0 0 4 0 Updated Mar 21, 2025
  • causal-npi-effects Public

    A causal machine learning framework to assess effects of non-pharmaceutical interventions on pandemic disease spread.

    SCAI-BIO/causal-npi-effects’s past year of commit activity
    Python 0 Apache-2.0 0 0 0 Updated Mar 18, 2025
  • syndat Public

    Synthetic data quality evaluation & visualization

    SCAI-BIO/syndat’s past year of commit activity
    Python 2 MIT 0 1 0 Updated Mar 17, 2025
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