NPO when requesting custom terminology with ebi ols enabled #2
Description
With https://www.ebi.ac.uk/ols/api/ as additional ols endpoint, the request will crash with a NPE
{
"timestamp": 1701697120960,
"status": 500,
"error": "Internal Server Error",
"message": "No message available",
"trace": "java.lang.NullPointerException\n\tat de.fraunhofer.scai.bio.sam.service.impl.ols.json.JSONSOLRConceptSearch.deserialize(JSONSOLRConceptSearch.java:55)\n\tat de.fraunhofer.scai.bio.sam.service.impl.ols.json.JSONSOLRConceptSearch.deserialize(JSONSOLRConceptSearch.java:16)\n\tat com.google.gson.internal.bind.TreeTypeAdapter.read(TreeTypeAdapter.java:69)\n\tat retrofit2.converter.gson.GsonResponseBodyConverter.convert(GsonResponseBodyConverter.java:39)\n\tat retrofit2.converter.gson.GsonResponseBodyConverter.convert(GsonResponseBodyConverter.java:27)\n\tat retrofit2.ServiceMethod.toResponse(ServiceMethod.java:122)\n\tat retrofit2.OkHttpCall.parseResponse(OkHttpCall.java:217)\n\tat retrofit2.OkHttpCall.execute(OkHttpCall.java:180)\n\tat de.fraunhofer.scai.bio.sam.service.impl.ols.OLSConceptServiceImpl.suggestConceptInTerminology(OLSConceptServiceImpl.java:557)\n\tat de.fraunhofer.scai.bio.sam.service.impl.delegator.ConceptServiceDelegator.lambda$suggestConceptInTerminology$18(ConceptServiceDelegator.java:316)\n\tat java.base/java.util.stream.ReferencePipeline$3$1.accept(ReferencePipeline.java:195)\n\tat java.base/java.util.stream.ReferencePipeline$2$1.accept(ReferencePipeline.java:177)\n\tat java.base/java.util.ArrayList$ArrayListSpliterator.forEachRemaining(ArrayList.java:1625)\n\tat java.base/java.util.stream.AbstractPipeline.copyInto(AbstractPipeline.java:484)\n\tat java.base/java.util.stream.AbstractPipeline.wrapAndCopyInto(AbstractPipeline.java:474)\n\tat java.base/java.util.stream.ReduceOps$ReduceOp.evaluateSequential(ReduceOps.java:913)\n\tat java.base/java.util.stream.AbstractPipeline.evaluate(AbstractPipeline.java:234)\n\tat java.base/java.util.stream.ReferencePipeline.collect(ReferencePipeline.java:578)\n\tat de.fraunhofer.scai.bio.sam.service.impl.delegator.ConceptServiceDelegator.suggestConceptInTerminology(ConceptServiceDelegator.java:317)\n\tat de.fraunhofer.scai.bio.sam.controller.api.terminologies.ConceptSearchAndSuggestAPI.terminologyAutocompletion(ConceptSearchAndSuggestAPI.java:150)\n\tat java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke0(Native Method)\n\tat java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)\n\tat java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)\n\tat java.base/java.lang.reflect.Method.invoke(Method.java:564)\n\tat org.springframework.web.method.support.InvocableHandlerMethod.doInvoke(InvocableHandlerMethod.java:190)\n\tat org.springframework.web.method.support.InvocableHandlerMethod.invokeForRequest(InvocableHandlerMethod.java:138)\n\tat org.springframework.web.servlet.mvc.method.annotation.ServletInvocableHandlerMethod.invokeAndHandle(ServletInvocableHandlerMethod.java:105)\n\tat org.springframework.web.servlet.mvc.method.annotation.RequestMappingHandlerAdapter.invokeHandlerMethod(RequestMappingHandlerAdapter.java:879)\n\tat org.springframework.web.servlet.mvc.method.annotation.RequestMappingHandlerAdapter.handleInternal(RequestMappingHandlerAdapter.java:793)\n\tat org.springframework.web.servlet.mvc.method.AbstractHandlerMethodAdapter.handle(AbstractHandlerMethodAdapter.java:87)\n\tat org.springframework.web.servlet.DispatcherServlet.doDispatch(DispatcherServlet.java:1040)\n\tat org.springframework.web.servlet.DispatcherServlet.doService(DispatcherServlet.java:943)\n\tat org.springframework.web.servlet.FrameworkServlet.processRequest(FrameworkServlet.java:1006)\n\tat org.springframework.web.servlet.FrameworkServlet.doGet(FrameworkServlet.java:898)\n\tat javax.servlet.http.HttpServlet.service(HttpServlet.java:634)\n\tat org.springframework.web.servlet.FrameworkServlet.service(FrameworkServlet.java:883)\n\tat javax.servlet.http.HttpServlet.service(HttpServlet.java:741)\n\tat org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:231)\n\tat org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:166)\n\tat org.apache.tomcat.websocket.server.WsFilter.doFilter(WsFilter.java:53)\n\tat org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:193)\n\tat org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:166)\n\tat org.springframework.boot.actuate.metrics.web.servlet.WebMvcMetricsFilter.doFilterInternal(WebMvcMetricsFilter.java:109)\n\tat org.springframework.web.filter.OncePerRequestFilter.doFilter(OncePerRequestFilter.java:119)\n\tat org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:193)\n\tat org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:166)\n\tat org.springframework.web.filter.CharacterEncodingFilter.doFilterInternal(CharacterEncodingFilter.java:201)\n\tat org.springframework.web.filter.OncePerRequestFilter.doFilter(OncePerRequestFilter.java:119)\n\tat org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:193)\n\tat org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:166)\n\tat org.apache.catalina.core.StandardWrapperValve.invoke(StandardWrapperValve.java:202)\n\tat org.apache.catalina.core.StandardContextValve.invoke(StandardContextValve.java:96)\n\tat org.apache.catalina.authenticator.AuthenticatorBase.invoke(AuthenticatorBase.java:541)\n\tat org.apache.catalina.core.StandardHostValve.invoke(StandardHostValve.java:139)\n\tat org.apache.catalina.valves.ErrorReportValve.invoke(ErrorReportValve.java:92)\n\tat org.apache.catalina.core.StandardEngineValve.invoke(StandardEngineValve.java:74)\n\tat org.apache.catalina.connector.CoyoteAdapter.service(CoyoteAdapter.java:343)\n\tat org.apache.coyote.http11.Http11Processor.service(Http11Processor.java:373)\n\tat org.apache.coyote.AbstractProcessorLight.process(AbstractProcessorLight.java:65)\n\tat org.apache.coyote.AbstractProtocol$ConnectionHandler.process(AbstractProtocol.java:868)\n\tat org.apache.tomcat.util.net.NioEndpoint$SocketProcessor.doRun(NioEndpoint.java:1594)\n\tat org.apache.tomcat.util.net.SocketProcessorBase.run(SocketProcessorBase.java:49)\n\tat java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1130)\n\tat java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:630)\n\tat org.apache.tomcat.util.threads.TaskThread$WrappingRunnable.run(TaskThread.java:61)\n\tat java.base/java.lang.Thread.run(Thread.java:832)\n",
"path": "/api/v1/terminologies/gecco_plus/concepts/autocomplete"
}