[Auto-generated] Update dependencies #2424
Workflow file for this run
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
| name: CD - Deploy documentation to GH Pages | |
| on: | |
| push: | |
| branches: ["master"] | |
| pull_request: | |
| # Allows you to run this workflow manually from the Actions tab | |
| workflow_dispatch: | |
| # Sets permissions of the GITHUB_TOKEN to allow deployment to GitHub Pages | |
| permissions: | |
| contents: read | |
| pages: write | |
| id-token: write | |
| # Allow one concurrent deployment | |
| concurrency: | |
| group: pages-${{ github.ref }} | |
| cancel-in-progress: true | |
| env: | |
| ONTODOC_DIR: doc | |
| BUILD_DIR: tmp | |
| PUBLISH_DIR: pages | |
| jobs: | |
| compile: | |
| runs-on: ubuntu-latest | |
| steps: | |
| - name: Checkout | |
| uses: actions/checkout@v4 | |
| - name: Setup Python 3.10 | |
| uses: actions/setup-python@v5 | |
| with: | |
| python-version: "3.10" | |
| - name: Setup Pages | |
| uses: actions/configure-pages@v5 | |
| - name: Install system dependencies | |
| run: | | |
| sudo apt-get update --fix-missing | |
| sudo apt-get install \ | |
| libxml2-dev \ | |
| libxslt-dev \ | |
| libhdf5-dev \ | |
| swig4.0 \ | |
| doxygen \ | |
| graphviz \ | |
| python3 \ | |
| python3-pip \ | |
| python3-dev \ | |
| python3-numpy \ | |
| python3-yaml | |
| #python3 -m pip install psycopg2-binary==2.9.5 | |
| - name: Available version of installed programs | |
| run: | | |
| python --version | |
| swig -version | |
| doxygen --version | |
| dot -V | |
| - name: Install Python dependencies | |
| run: | | |
| pip install --upgrade pip | |
| pip install -U setuptools wheel | |
| pip install -r requirements.txt -r requirements_doc.txt | |
| - name: Run CMAKE | |
| run: | | |
| mkdir -p build | |
| cd build | |
| Python3_ROOT=$(python3 -c 'import sys; print(sys.exec_prefix)') \ | |
| CFLAGS='-Wno-missing-field-initializers' \ | |
| cmake .. -DFORCE_EXAMPLES=ON -DWITH_DOC=ON | |
| - name: Run MakeFile | |
| run: make | |
| working-directory: build | |
| - name: Upload artifact | |
| uses: actions/upload-pages-artifact@v3 | |
| with: | |
| path: 'build/doc/html/' | |
| deploy: | |
| if: github.event_name != 'pull_request' | |
| environment: | |
| name: github-pages | |
| url: ${{ steps.deployment.outputs.page_url }} | |
| runs-on: ubuntu-latest | |
| needs: compile | |
| steps: | |
| - name: Deploy to GitHub Pages | |
| id: deployment | |
| uses: actions/deploy-pages@v4 |