Added requirements_full to ci docker file #2
Workflow file for this run
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| name: CI build and test | |
| on: [push] | |
| jobs: | |
| ci_build_and_test: | |
| runs-on: ubuntu-20.04 | |
| steps: | |
| - uses: actions/checkout@v3 | |
| - name: apt-get update | |
| run: | | |
| sudo apt-get update --fix-missing | |
| - name: Workaround - install CMake 3.25.2 since 3.26.0 doesn't work | |
| run: | | |
| sudo apt remove cmake | |
| sudo apt purge --auto-remove cmake | |
| wget http://www.cmake.org/files/v3.25/cmake-3.25.2.tar.gz | |
| tar xf cmake-3.25.2.tar.gz | |
| cd cmake-3.25.2 | |
| ./configure | |
| make | |
| sudo make install | |
| hash -r | |
| cd - | |
| - name: Show CMake version | |
| run: | | |
| cmake --version | |
| - name: Install dependencies | |
| run: | | |
| sudo apt-get install \ | |
| libhdf5-dev \ | |
| swig4.0 \ | |
| doxygen \ | |
| graphviz \ | |
| python3 \ | |
| python3-pip \ | |
| python3-dev \ | |
| python3-numpy \ | |
| python3-yaml | |
| - name: Install Python dependencies | |
| run: | | |
| pip install --upgrade pip -r requirements.txt | |
| pip install -r requirements_full.txt | |
| pip install -r requirements_dev.txt | |
| pip install -r requirements_doc.txt | |
| - name: check numpy | |
| run: | | |
| which python3 | |
| python3 --version | |
| pip3 --version | |
| python3 -c 'import numpy as np; print(np.get_include())' | |
| - name: configure | |
| run: | | |
| mkdir build | |
| cd build | |
| Python3_ROOT=$(python3 -c 'import sys; print(sys.exec_prefix)') \ | |
| CFLAGS='-Wno-missing-field-initializers' \ | |
| cmake .. -DFORCE_EXAMPLES=ON -DWITH_FORTRAN=YES | |
| cd - | |
| - name: make | |
| run: | | |
| cd build | |
| make | |
| cd - | |
| - name: install | |
| run: | | |
| cd build | |
| make install | |
| cd - | |
| - name: make test | |
| run: | | |
| cd build | |
| ctest || ctest --rerun-failed --output-on-failure -V | |
| cd - | |
| - name: build Linux wheel | |
| run: | | |
| cd python | |
| pip install numpy wheel | |
| python3 setup.py bdist_wheel | |
| cd - | |
| - name: Install python package via setup.py and test the installation | |
| run: | | |
| cd python | |
| python3 setup.py install --user | |
| cd ../bindings/python/tests | |
| python3 __main__.py |