made minor edits

STRIDES · Jan 10, 2025 · 60eb4fc · 60eb4fc
1 parent f3d7e2a
commit 60eb4fc
Showing 1 changed file with 5 additions and 5 deletions.
diff --git a/notebooks/Snakemake/AWS-ParallelCluster.ipynb b/notebooks/Snakemake/AWS-ParallelCluster.ipynb
@@ -154,7 +154,7 @@
    "source": [
     "### Set up your head node\n",
     "\n",
-    "After cluster creation completes, click on the **Shell** button to access the cluster head node. We will be working in the Parallel Cluster shell through out the rest of the tutorial. All commands will be entered there.\n"
+    "After cluster creation completes, click on the **Shell** button to access the cluster head node. We will be working in the Parallel Cluster shell throughout the rest of the tutorial, all commands will be entered there.\n"
    ]
   },
   {
@@ -184,7 +184,7 @@
    "id": "73692fbe",
    "metadata": {},
    "source": [
-    "3. Install mamba. This is required as we will be executing Snakemake using mamba. "
+    "2. Install mamba. This is required as we will be executing Snakemake using mamba. "
    ]
   },
   {
@@ -209,7 +209,7 @@
    "source": [
     "3. Install Snakemake and the Snakemake ParallelCluster plugin. \n",
     "\n",
-    "Note: the PCluster plugin requires Snakemake > 8.0.0"
+    "**Note:** the PCluster plugin requires Snakemake > 8.0.0"
    ]
   },
   {
@@ -265,7 +265,7 @@
    "id": "d4a39461-f53e-49db-9354-862f7fd8d20f",
    "metadata": {},
    "source": [
-    "To create files in the Parallel Cluster shell using the text editor Vim."
+    "To create files in the Parallel Cluster shell we are using the text editor Vim."
    ]
   },
   {
@@ -796,7 +796,7 @@
    "source": [
     "#### Execute the workflow \n",
     "\n",
-    "Execute the workflow using the **Snakemake** command, specifying **pcluster-Slurm** as the executor and **conda** as the environment management system. Here we are adding two new flags \n",
+    "Execute the workflow using the **Snakemake** command, specifying **pcluster-Slurm** as the executor and **conda** as the environment management system. Here we are adding two new flags:\n",
     "\n",
     "- **--use-conda --conda-frontend mamba**: This flag tells Snakemake to use mamba environments for managing dependencies. When this flag is used, Snakemake will look for environment.yaml files specified in the workflow rules and create mamba environments accordingly. \n",
     "\n",