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Create code_dev_2.txt
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RamiyapriyaS authored Jan 16, 2025
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Prompt 2 : "Write a Python script that performs differential expression analysis on RNA-Seq data using the edgeR package (via rpy2 for R integration). The script should:
1. Load a CSV file containing RNA-Seq read counts with columns: Gene ID, Sample 1, Sample 2, ..., Sample N.
2. Use the edgeR package to normalize the read counts and perform differential expression analysis between two specified conditions.
3. Output the results in a CSV file with columns: Gene ID, log2 Fold Change, p-value, Adjusted p-value, Differential Expression Status (Significant/Not Significant)."

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