CVProject

Cellpose Code in Cellpose_tuning

Optical Flow is in opticalflow.ipynb

NextFrameModels is in NextFramePrediction.ipynb, our old models are in FinalModel and 3d_Models

Utilities are in utils and cell analysis

processing 3d data is in VideoProcessing and VideoLoaders

Name		Name	Last commit message	Last commit date
Latest commit History 118 Commits
3DCT_Examples		3DCT_Examples
3DeeCellTracker (3DCT)		3DeeCellTracker (3DCT)
DataProcessing		DataProcessing
jlosertutils		jlosertutils
torch_datasets		torch_datasets
.gitignore		.gitignore
2D Motion Prediction.ipynb		2D Motion Prediction.ipynb
3D_OF_LK_threaded.ipynb		3D_OF_LK_threaded.ipynb
3D_smoothing_threaded.ipynb		3D_smoothing_threaded.ipynb
3d_Models.ipynb		3d_Models.ipynb
Bounding_Boxes(1).ipynb		Bounding_Boxes(1).ipynb
CellAnalysis.ipynb		CellAnalysis.ipynb
CellLSTM.ipynb		CellLSTM.ipynb
Comparison_Model.ipynb		Comparison_Model.ipynb
CziDataset.py		CziDataset.py
FinalModel.ipynb		FinalModel.ipynb
Models_with_labels.ipynb		Models_with_labels.ipynb
MotionTracking.ipynb		MotionTracking.ipynb
NextFramePrediction.ipynb		NextFramePrediction.ipynb
Processed_Model.ipynb		Processed_Model.ipynb
README.md		README.md
Setting Up GCP VM-1.pdf		Setting Up GCP VM-1.pdf
Setting Up GCP VM.pdf		Setting Up GCP VM.pdf
ShapeFeaturesModel.ipynb		ShapeFeaturesModel.ipynb
VideoLoaders.py		VideoLoaders.py
VideoProcessing.ipynb		VideoProcessing.ipynb
cellpose-tuning.ipynb		cellpose-tuning.ipynb
ffmpeg		ffmpeg
opticalflow.ipynb		opticalflow.ipynb
requirements.txt		requirements.txt
utils.py		utils.py

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