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@ScilifelabDataCentre

SciLifeLab Data Centre

The SciLifeLab Data Centre provides the SciLifeLab platforms with services for IT and data management.

The focus of the SciLifeLab Data Centre is on data arising from the use of SciLifeLab infrastructure platforms, both to promote research on adding value to data, research deriving biological knowledge from data, and infrastructure making data findable and available.

SciLifeLab sees data as one of the most valuable and long-lasting products of our operations. We strive to make our data FAIR, to handle it according to open science standards and to maximize its long-term value to the scientific community.

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  1. pathogens-portal pathogens-portal Public

    Swedish pathogens portal

    HTML 13 28

  2. dds_web dds_web Public

    A cloud-based system for the delivery of data from SciLifeLab Facilities to their users (e.g. research group).

    Python 9 8

  3. lunch-menu lunch-menu Public archive

    Menu parser for the restaurants near SciLifeLab in Solna and Uppsala

    Python 16 9

  4. dds_cli dds_cli Public

    The command line interface for access to the Data Delivery System primarily developed by the SciLifeLab Data Centre.

    Python 12 13

  5. form-manager form-manager Public

    A simple system for receiving form submissions.

    Python 1

Repositories

Showing 10 of 96 repositories
  • divbase Public

    (Work in Progress) DivBase - A service to manage, query and version VCF files and associated sample metadata

    ScilifelabDataCentre/divbase’s past year of commit activity
    Python 2 MIT 0 0 1 Updated Mar 5, 2026
  • serve Public

    SciLifeLab Serve is a platform offering machine learning model serving, data science app hosting (Shiny, Gradio, Streamlit, Dash, etc.), and other tools to life science researchers affiliated with a Swedish research institute.

    ScilifelabDataCentre/serve’s past year of commit activity
    Python 14 Apache-2.0 3 0 6 Updated Mar 5, 2026
  • omero-oauth Public Forked from labsyspharm/omero-oauth

    OMERO.web application to allow OAuth2 login to OMERO

    ScilifelabDataCentre/omero-oauth’s past year of commit activity
    Python 1 AGPL-3.0 4 0 1 Updated Mar 5, 2026
  • RDM-guidelines Public

    This is the repository for SciLifelab Research Data Management (RDM) guidelines, a central resource to provide information about data management.

    ScilifelabDataCentre/RDM-guidelines’s past year of commit activity
    HTML 5 MIT 5 19 (1 issue needs help) 3 Updated Mar 5, 2026
  • swedish-pathogens-portal Public

    WIP repository for Swedish Pathogens Portal 2.0

    ScilifelabDataCentre/swedish-pathogens-portal’s past year of commit activity
    HTML 2 MIT 0 3 15 Updated Mar 5, 2026
  • Anubis Public

    Proposal submission and review handling system.

    ScilifelabDataCentre/Anubis’s past year of commit activity
    Python 2 MIT 3 3 69 Updated Mar 5, 2026
  • dds_cli Public

    The command line interface for access to the Data Delivery System primarily developed by the SciLifeLab Data Centre.

    ScilifelabDataCentre/dds_cli’s past year of commit activity
    Python 12 MIT 13 0 48 Updated Mar 5, 2026
  • dds_web Public

    A cloud-based system for the delivery of data from SciLifeLab Facilities to their users (e.g. research group).

    ScilifelabDataCentre/dds_web’s past year of commit activity
    Python 9 8 0 118 Updated Mar 5, 2026
  • scilifelab-ai-agent-mcp-workshop-2026-03-05 Public

    A workshop on "Developing AI Agents in Life Sciences" by SciLifeLab Data Centre. Hands-on sessions at Air & Fire, Solna, introducing AI Agents in life science. For researchers, PhD students, and research infrastructure staff interested in practical sessions with AI Agents.

    ScilifelabDataCentre/scilifelab-ai-agent-mcp-workshop-2026-03-05’s past year of commit activity
    Jupyter Notebook 6 MIT 0 0 1 Updated Mar 4, 2026
  • ScilifelabDataCentre/DIGIfor1Health_web’s past year of commit activity
    SCSS 0 MIT 1 2 1 Updated Mar 4, 2026

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