How to install it

conda install preprocessing -c fasnicar

How to use it

Example command line:

parallel -j NCPU 'preprocess.sh -i {} [other params]' ::: `ls input_folder`

where:

• preprocess.sh takes one parameter which is the input folder containing the raw reads
• input folder should contains the raw reads

Building conda package

conda build recipe --python 3 -c bioconda