Version 0.4.1

• Overhauled unit tests with more modular saved inputs and expected outputs (#92)
• Made warnings encountered in the chiimp script display as they occur, rather than at the end (#91)
• Made load_dataset warn about repeated Sample+Replicate+Locus entries across rows (#90)
• Made load_config warn about any unrecognized configuration file entries (#88)

Version 0.4.0

• Fixed desktop icon drag-and-drop for recent Linux distributions (#85)
• Fixed genotype summary table row ordering for certain edge cases (#81)
• Fixed pandoc error with newer RStudio versions (>= 2022.02) by finding pandoc automatically (#75)
• Made load_csv use custom row names if given (#74)
• Made installer obey site-wide R configuration if present (#72)
• Fixed superfluous quotes in report HTML file when rendered with newer pandoc (#69)
• Fixed spurious warnings during histogram plotting due to missing data (#66)
• Added option for custom text in genotype summary tables for untested locus/sample combinations (#64)
• Made save_csv automatically create any parent directories as needed (#63)
• Fixed handling of extra pheatmap arguments in plot_dist_mat (#62)

Version 0.3.1

• Fixed icon setup on Mac OS (#56).

Version 0.3.0

• Improved icon setup on Mac OS (#48).
• Added support for use of reverse primers in locus-matching (#47).
• Made read count ratio thresholds for PCR stutter and artifact sequence flagging customizable (#46).
• Added drag-and-drop usage message when desktop icon is opened directly (#44).
• Added load_csv and save_csv functions to centralize loading and saving tabular data (#43).
• Reorganized installer and wrapper scripts (#38).
• Added support for demo scripts and integration testing in Mac OS (#32).

Version 0.2.3

• Fixed package checks and testing on latest R development releases (#27).
• Fixed test behavior on Windows and improved test organization (#16).
• Added documentation corrections and improvements.

Version 0.2.2

• Fixed heatmap plotting via updated plot_heatmap for cases with blank
  results and only one unique non-blank value (#22).
• Added check in analyze_dataset for locus name mismatches between dataset
  table and locus attributes table (#21).
• Added check in prepare_dataset for missing data directory (#20).
• Added check in prepare_dataset for zero-detected-files case.
• Added check in load_dataset for missing data files.
• Added check in full_analysis to warn if any input data files are
  completely empty.

Version 0.2.1

Merge pull request #15 from ShawHahnLab/release-0.2.1

Release 0.2.1

Version 0.2.0

Merge branch 'release-0.2.0'

Version 0.1.0

Merge branch 'release-0.1.0'

First version release.