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@fiji @scijava @imagej @scifio @imglib @trakem2 @bigdataviewer @PreibischLab

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  1. imglib/imglib2 imglib/imglib2 Public

    A generic next-generation Java library for image processing

    Java 303 91

  2. fiji/Stitching fiji/Stitching Public

    Fiji's Stitching plugins reconstruct big images from tiled input images.

    Java 98 65

  3. PreibischLab/BigStitcher PreibischLab/BigStitcher Public

    ImgLib2/BDV implementation of Stitching for large datasets

    Java 69 16

  4. PreibischLab/RS-FISH PreibischLab/RS-FISH Public

    Tool for precise, interactive, fast and scalable FISH spot detection

    Java 48 14

  5. JaneliaSciComp/BigStitcher-Spark JaneliaSciComp/BigStitcher-Spark Public

    Running compute-intense parts of BigStitcher distributed

    Java 23 12

  6. saalfeldlab/render saalfeldlab/render Public

    Render transformed image tiles

    Java 34 33