Skip to content

Commit

Permalink
Update CADD's usage
Browse files Browse the repository at this point in the history
  • Loading branch information
nojux-official committed May 10, 2024
1 parent 307bce2 commit 5b2de50
Showing 1 changed file with 2 additions and 3 deletions.
5 changes: 2 additions & 3 deletions README.md
Original file line number Diff line number Diff line change
Expand Up @@ -19,6 +19,5 @@ spliceai -I ./tests/tools/spliceai/input.vcf -O ./tests/tools/spliceai/actual_ou
## Usage
### CADD
CADD SNV scoress can be obtained in JSON format:
```
python -c 'from tools.CADD.CADD import *; print(fetch_cadd_score("v1.3", 5, 2003402))'
```

`python tools/CADD/CADD.py v1.3 5 --position 2003402` or `python tools/CADD/CADD.py GRCh38-v1.4 22 --start 44044001 --end 44044002`

0 comments on commit 5b2de50

Please sign in to comment.