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Releases: SuperCowPowers/workbench

v0.8.304

10 Apr 21:32

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  • flake8/linter fixes
  • some simplification of the inference cache internal logic
  • flake8/linter fixes
  • new InferenceCache class that wraps endpoints and caches results
  • flake8/linter fixes
  • adding a conformer timeout mechanism
  • don't print out the metrics when they are empty
  • updating 3D feature endpoint docs
  • changing the complexity logic and adding more details on the SMARTs patterns
  • changing the number of threads option for the conformation
  • putting in a bit of logic to not recreate the model
  • changing the batch_size and bigger image
  • updating the 3D docs
  • flake8/linter fixes
  • add a 3D Endpoint test
  • flake8/linter fixes
  • a bunch of changes for the 3D descriptor endpoint and supporting utils/tests
  • flake8/linter fixes
  • updating the complexity check and ripping out the timeout that doesn't work with C++ code/optimizer
  • flake8/linter fixes
  • adding corner case tests
  • adding a UFFHasAllMoleculeParams() check before sending to conformer
  • adding 3D molecular descriptors in the overview page
  • flake8/linter fixes
  • adding a blog about our 3D descriptors endpoint
  • a bunch of updates to our 3D descriptors calculations
  • 3D endpoint tuning: bump serverless memory to 6144MB and reduce batch size to 10
  • SageMaker v3 fixes: OutputDataConfig compression_type and training_harness auto-copy
  • add a readme that show how to deploy
  • adding the training_harness copy for custom model scripts
  • adding OutputDataConfig args for our model training parameters
  • flake8/linter fixes
  • adding a complexity check for the 3D Features Calculation to address slow endpoint times
  • bumping versions of workbench for ml_pipeline image

v0.8.303

09 Apr 00:07

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  • fix the imports for our monkey patch
  • monkey path a bug in Sagemaker v3 DataCaptureConfigSummary.kms_key_id

v0.8.302

08 Apr 21:23

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  • changing start_date to after_date to be more explicit
  • a refactoring of how the temporal split logic works to support dates

v0.8.301

08 Apr 19:34

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  • bumping the version of workbench-bridges
  • removing the refresh session code.. wasn't the bug/issue we were looking for

v0.8.300

08 Apr 14:11

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  • simplify the disabling of the sagemaker rich logging
  • adding functionality to reset our aws session
  • bumping versions of workbench for ml_pipeline image

v0.8.299

07 Apr 20:01

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  • changes to the combine_multi_task_data functionality
  • increasing the batch time out to 24 hours
  • flake8/linter fixes
  • adding a public data test
  • flake8/linter fixes
  • adding a sleep after the sample_weights table delete
  • adding some multi task utils
  • just some cleanup
  • adding a _disable_sagemaker_rich_logging() method to disable Sagemaker v3 terrible 'rich' logging

v0.8.298

01 Apr 20:45

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  • flake8/linter fixes
  • adding a spawn test for FeatureGroup ingestion
  • adding a spawn test for FeatureGroup ingestion
  • putting in logic to have normal amount of workers/processsors on linux but fall back to single thread on Mac (spawn bug in sagemaker)
  • flake8/linter fixes
  • switching over to using the new PublicData class

v0.8.297

30 Mar 21:58

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  • installing workbench and workbench-bridges in a separate layer
  • put in a fix for sample rows

v0.8.296

30 Mar 18:53

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  • flake8/linter fixes
  • adding public data outputs to the git ignore
  • adding functionality to pull public data
  • adding an import alias to workbench-bridges PublicData
  • bumping the version of workbench-bridges
  • adding a known counterions list that used as part of the fragment processing
  • add handling for ReadTimeoutError for Endpoints under load
  • adding a LaplacianSmoothness class
  • adding a LaplacianSmoothness class
  • small logic change to neighbor_median
  • adding a python link in our pytorch_chem training Dockerfile

v0.8.295

27 Mar 16:55

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  • fix path for ml_pipeline image creation
  • rename TestDataGenerator to SyntheticDataGenerator
  • setting 6 hour max training time
  • flake8/linter fixes
  • moving over to the new training harness that works with Sagemaker V3
  • removing include_code_and_meta_for_inference() from model templates
  • removing include_code_and_meta_for_inference() from model templates
  • some code coverage setup
  • updating the workbench-bridges version to 0.2.0
  • small readme change
  • a large refactor of the sagemaker images for training and inference