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@TF-Chan-Lab

TF-Chan-Lab

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  1. panGraphViewer panGraphViewer Public

    Show pangenome graphs in an easy way

    JavaScript 54 5

  2. OMBlast OMBlast Public

    An alignment tool for optical mapping data

    Java 8 3

  3. OMTools OMTools Public

    A software package for optical mapping data processing, analysis and visualization

    Java 7 4

  4. ViralFusionSeq ViralFusionSeq Public

    Accurately discover viral integration events and fusion transcripts

    Perl 5 1

  5. miRDeep-P2_pipeline miRDeep-P2_pipeline Public

    Perl 5 1

  6. LAFITE LAFITE Public

    tool for long read transcriptome assembly

    Jupyter Notebook 3 1

Repositories

Showing 9 of 9 repositories
  • miRDeep-P2_pipeline Public
    TF-Chan-Lab/miRDeep-P2_pipeline’s past year of commit activity
    Perl 5 GPL-3.0 1 1 0 Updated Feb 24, 2024
  • ViralFusionSeq Public

    Accurately discover viral integration events and fusion transcripts

    TF-Chan-Lab/ViralFusionSeq’s past year of commit activity
    Perl 5 GPL-3.0 1 2 0 Updated Oct 13, 2023
  • rG4-seeker Public
    TF-Chan-Lab/rG4-seeker’s past year of commit activity
    Python 2 GPL-3.0 1 2 0 Updated Aug 31, 2023
  • LAFITE Public

    tool for long read transcriptome assembly

    TF-Chan-Lab/LAFITE’s past year of commit activity
    Jupyter Notebook 3 Apache-2.0 1 0 0 Updated Aug 24, 2023
  • panGraphViewer Public

    Show pangenome graphs in an easy way

    TF-Chan-Lab/panGraphViewer’s past year of commit activity
    JavaScript 54 MIT 5 8 0 Updated Sep 9, 2022
  • miRDeep2_pipeline Public
    TF-Chan-Lab/miRDeep2_pipeline’s past year of commit activity
    Perl 1 GPL-3.0 0 0 0 Updated Jun 27, 2021
  • CAG_RNA_toxicity Public

    This repository is for depositing codes used in the manuscript, titled "CAG RNAs induce DNA damage and apoptosis by silencing NUDT16 expression in polyglutamine degeneration".

    TF-Chan-Lab/CAG_RNA_toxicity’s past year of commit activity
    Perl 0 GPL-3.0 0 0 0 Updated May 6, 2021
  • OMTools Public

    A software package for optical mapping data processing, analysis and visualization

    TF-Chan-Lab/OMTools’s past year of commit activity
    Java 7 4 4 0 Updated Jun 19, 2020
  • OMBlast Public

    An alignment tool for optical mapping data

    TF-Chan-Lab/OMBlast’s past year of commit activity
    Java 8 3 2 0 Updated May 29, 2020

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