Repo for generating OMERO reports/dashboards
Create an environment. Currently working dependency versions are in requirements.txt.
python -m venv <venv_path>
source <venv_path>/bin/activate
pip install https://github.com/glencoesoftware/zeroc-ice-py-linux-x86_64/releases/download/20240202/zeroc_ice-3.6.5-cp39-cp39-manylinux_2_28_x86_64.whl
pip install ezomero pandas requests
Copy config_example.py to config.py and fill in values.
Collect data with python collect_daily.py FOLDER or python collect_hourly.py FOLDER.