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Feat: Check if item version is already preserved before bagging (Issue #102) #103

Merged
merged 61 commits into from
Sep 16, 2024
Merged

Feat: Check if item version is already preserved before bagging (Issue #102) #103

merged 61 commits into from
Sep 16, 2024

Commits on Jun 5, 2024

  1. Check if bag exists in AP Trust and Wasabi before creating the bag

    adepojuh authored and adepojuh committed Jun 5, 2024
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Commits on Jun 10, 2024

  1. Document all functions in figshare/Utils.py

    ho.adepoju@gmail.com authored and ho.adepoju@gmail.com committed Jun 10, 2024
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  2. Check if bag exists in AP Trust and Wasabi before creating the bag

    @HafeezOJ
    HafeezOJ committed Jun 10, 2024
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  3. Document all functions in figshare/Utils.py

    @HafeezOJ
    HafeezOJ committed Jun 10, 2024
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  4. Merge branch '102-feature-check-if-bag-exist-in-ap-trust-prior-to-bag… 

    …ging'
    @HafeezOJ
    HafeezOJ committed Jun 10, 2024
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Commits on Jun 11, 2024

  1. Count and log already preserved collections

    @HafeezOJ
    HafeezOJ committed Jun 11, 2024
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Commits on Jun 12, 2024

  1. Include AP Trust details in .env.sample.ini

    @HafeezOJ
    HafeezOJ committed Jun 12, 2024
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Commits on Jun 17, 2024

  1. Include aptrust_api configuration in How to run section of README.md

    @HafeezOJ
    HafeezOJ committed Jun 17, 2024
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  2. Correct preservation_storage_location in README.md

    @HafeezOJ
    HafeezOJ committed Jun 17, 2024
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  3. Lint

    @HafeezOJ
    HafeezOJ committed Jun 17, 2024
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Commits on Aug 8, 2024

  1. Skip authors list in metadata sorting

    @HafeezOJ
    HafeezOJ committed Aug 8, 2024
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Commits on Aug 20, 2024

  1. Remove logging for articles not found in Wasabi or AP Trust

    @HafeezOJ
    HafeezOJ committed Aug 20, 2024
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  2. Keep counts of skipped articles and versions in a class dict

    @HafeezOJ
    HafeezOJ committed Aug 20, 2024
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Commits on Aug 26, 2024

  1. Fix counts of articles in log

    @HafeezOJ
    HafeezOJ committed Aug 26, 2024
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  2. Make a function to get preserved packages filenames and their sizes f… 

    …rom Wasabi
    @HafeezOJ
    HafeezOJ committed Aug 26, 2024
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  3. Make check_wasabi() return a tuple containing hash and size in Utils.py

    @HafeezOJ
    HafeezOJ committed Aug 26, 2024
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  4. Get wasabi_preserved_size from check_wasabi() in Article.py

    @HafeezOJ
    HafeezOJ committed Aug 26, 2024
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Commits on Aug 28, 2024

  1. Document get_filenames_and_sizes_from_ls() in Utils.py

    @HafeezOJ
    HafeezOJ committed Aug 28, 2024
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Commits on Aug 29, 2024

  1. Create a function calculate size of UAL_RDM in Utils.py

    @HafeezOJ
    HafeezOJ committed Aug 29, 2024
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  2. Create a function to calculate Figshare json file size in Utils.py

    @HafeezOJ
    HafeezOJ committed Aug 29, 2024
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  3. Create a function to calculate payload size in Utils.py

    @HafeezOJ
    HafeezOJ committed Aug 29, 2024
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  4. Correct variable names in calculate_payload_size and calculate_json_f… 

    …ile_size
    @HafeezOJ
    HafeezOJ committed Aug 29, 2024
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  5. Return AP Trust payload size in get_preserved_version_hash_and_size

    @HafeezOJ
    HafeezOJ committed Aug 29, 2024
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  6. Remove unused imports from and variables in Utils.py

    @HafeezOJ
    HafeezOJ committed Aug 29, 2024
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Commits on Aug 30, 2024

  1. Log size mismatch if any for already preserved article

    @HafeezOJ
    HafeezOJ committed Aug 30, 2024
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  2. Use tempfile in place of buffer folder creation

    @HafeezOJ
    HafeezOJ committed Aug 30, 2024
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  3. Fix sorting where there are no uniform fields in nested dicts

    @HafeezOJ
    HafeezOJ committed Aug 30, 2024
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  4. Include recursive sort of nested lists

    @HafeezOJ
    HafeezOJ committed Aug 30, 2024
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  5. Initialize already_preserved_counts_dict items at class level

    @HafeezOJ
    HafeezOJ committed Aug 30, 2024
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  6. Avoid unsupported dict < dict in recursive sorting

    @HafeezOJ
    HafeezOJ committed Aug 30, 2024
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  7. Add more to AP Trust config

    @HafeezOJ
    HafeezOJ committed Aug 30, 2024
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Commits on Aug 31, 2024

  1. Paginate calls to AP Trust

    @HafeezOJ
    HafeezOJ committed Aug 31, 2024
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  2. Remove duplicate log messages

    @HafeezOJ
    HafeezOJ committed Aug 31, 2024
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  3. Document new functions in Utils.py

    @HafeezOJ
    HafeezOJ committed Aug 31, 2024
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Commits on Sep 1, 2024

  1. Fix summary counts for collections

    @HafeezOJ
    HafeezOJ committed Sep 1, 2024
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  2. Use set to keep articles skipped in Article.py

    @HafeezOJ
    HafeezOJ committed Sep 1, 2024
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  3. Remove unused lines

    @HafeezOJ
    HafeezOJ committed Sep 1, 2024
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Commits on Sep 2, 2024

  1. Document skipping of already preserved article

    @HafeezOJ
    HafeezOJ committed Sep 2, 2024
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  2. Document skipping of already preserved collection

    @HafeezOJ
    HafeezOJ committed Sep 2, 2024
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  3. Remove unused lines

    @HafeezOJ
    HafeezOJ committed Sep 2, 2024
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  4. Remove item_type from AP Trust config

    @HafeezOJ
    HafeezOJ committed Sep 2, 2024
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  5. Document additional config for AP Trust in README

    @HafeezOJ
    HafeezOJ committed Sep 2, 2024
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Commits on Sep 3, 2024

  1. Remove Pycharm-specific import format for multi-level folders

    @HafeezOJ
    HafeezOJ committed Sep 3, 2024
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  2. Lint

    @HafeezOJ
    HafeezOJ committed Sep 3, 2024
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  3. Lint

    @HafeezOJ
    HafeezOJ committed Sep 3, 2024
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Commits on Sep 4, 2024

  1. Correct AP Trust url in README

    @HafeezOJ
    HafeezOJ committed Sep 4, 2024
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  2. Remove PyCharm auto-import style

    @HafeezOJ
    HafeezOJ committed Sep 4, 2024
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  3. Fix strings that broken into newlines in the codes

    @HafeezOJ
    HafeezOJ committed Sep 4, 2024
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Commits on Sep 5, 2024

  1. Align log count figures

    @HafeezOJ
    HafeezOJ committed Sep 5, 2024
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Commits on Sep 9, 2024

  1. Reorder log messages

    @HafeezOJ
    HafeezOJ committed Sep 9, 2024
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  2. Remove warning when collections are skipped and fetched/processed cou… 

    …nts match
    @HafeezOJ
    HafeezOJ committed Sep 9, 2024
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  3. Append / to AP Trust base url if not present

    @HafeezOJ
    HafeezOJ committed Sep 9, 2024
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  4. Lint

    @HafeezOJ
    HafeezOJ committed Sep 9, 2024
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  5. Lint

    @HafeezOJ
    HafeezOJ committed Sep 9, 2024
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  6. Align log figures based on standard Linux terminal

    @HafeezOJ
    HafeezOJ committed Sep 9, 2024
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Commits on Sep 11, 2024

  1. Clean up and prettify log outputs

    @zoidy
    zoidy committed Sep 11, 2024
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  2. lint

    @zoidy
    zoidy committed Sep 11, 2024
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Commits on Sep 16, 2024

  1. Skip checking required space when all articles are skipped

    @HafeezOJ
    HafeezOJ committed Sep 16, 2024
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  2. Exclude size of curation folder for skipped articles during space check

    @HafeezOJ
    HafeezOJ committed Sep 16, 2024
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  3. Lint

    @HafeezOJ
    HafeezOJ committed Sep 16, 2024
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  4. Lint

    @HafeezOJ
    HafeezOJ committed Sep 16, 2024
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