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  1. RNASeq-NF Public

    RNASeq-NF is an NGS analysis pipeline for RNA expression quantification.

    Nextflow 8 8

  2. NF-IAP Public

    Illumina Analysis Pipeline in Nextflow

    Nextflow 3 5

  3. NextflowModules Public

    UMCU Genetics Nextflow modules

    Nextflow 27 10

Repositories

Showing 10 of 146 repositories
  • 4 CC0-1.0 0 0 0 Updated Feb 13, 2025
  • DIMS Public

    Direct Infusion Mass Spectrometry pipeline

    Nextflow 2 MIT 2 11 1 Updated Feb 13, 2025
  • CustomModules Public
    R 1 MIT 0 0 2 Updated Feb 13, 2025
  • USEQ_tools Public

    Utility scripts to work with Genologics Clarity LIMS

    Python 2 MIT 0 0 2 Updated Feb 13, 2025
  • cuplr Public

    Predicting tumor type using WGS derived features

    R 5 GPL-3.0 2 1 0 Updated Feb 12, 2025
  • mutSigExtractor Public

    An R package for extracting mutational signatures from vcf files

    R 10 GPL-3.0 6 4 0 Updated Feb 13, 2025
  • CHORD Public

    An R package for predicting HR deficiency from mutation contexts

    R 27 GPL-3.0 7 3 0 Updated Feb 13, 2025
  • clarity_epp Public

    Clarity LIMS epp scripts

    Python 1 MIT 0 0 1 Updated Feb 12, 2025
  • hpcguix-web Public

    The code that drives https://hpc.guix.info/browse.

    JavaScript 11 AGPL-3.0 3 2 0 Updated Feb 10, 2025
  • DxNextflowRNA Public
    R 0 0 0 2 Updated Feb 10, 2025