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Update usage.md
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tives82 authored Dec 8, 2023
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Expand Up @@ -132,7 +132,7 @@ work # Directory containing the nextflow working files
Additional example using singularity profile and SRA file input.

```console
nextflow run main.nf -profile singularity --add_sra_file sra_file.csv --outdir <OUTDIR>
nextflow run main.nf -profile docker --add_sra_file sra_file.csv --outdir <OUTDIR>
```

### Updating the pipeline
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