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reformatted flu_nextclade_variables.py with python black
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tives82 committed Mar 14, 2024
1 parent a1af0e9 commit aaf2ffe
Showing 1 changed file with 6 additions and 5 deletions.
11 changes: 6 additions & 5 deletions bin/flu_nextclade_variables.py
Original file line number Diff line number Diff line change
Expand Up @@ -7,12 +7,13 @@

# Dictionary containing data for various flu subtypes with their associated datasets.
flu_subtypes = {
"H1N1": {"dataset": 'flu_h1n1pdm_ha'},
"H3N2": {"dataset": 'flu_h3n2_ha'},
"Victoria": {"dataset": 'flu_vic_ha'},
"Yamagata": {"dataset": 'flu_yam_ha'},
"H1N1": {"dataset": "flu_h1n1pdm_ha"},
"H3N2": {"dataset": "flu_h3n2_ha"},
"Victoria": {"dataset": "flu_vic_ha"},
"Yamagata": {"dataset": "flu_yam_ha"},
}


def main():
# Set up an argument parser to accept input arguments for the script
parser = argparse.ArgumentParser(
Expand Down Expand Up @@ -47,6 +48,6 @@ def main():
f.write(f"{dataset}\n")
print(f" {dataset}: {dataset} (output to {file_path})")


if __name__ == "__main__":
main()

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