.github/workflows/run-scripts.yml #775
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on: | |
schedule: | |
- cron: "0 6 * * *" | |
jobs: | |
generate-data: | |
runs-on: ${{ matrix.config.os }} | |
name: ${{ matrix.config.os }} (${{ matrix.config.r }}) | |
strategy: | |
fail-fast: false | |
matrix: | |
config: | |
- {os: ubuntu-latest, r: 'release'} | |
env: | |
R_REMOTES_NO_ERRORS_FROM_WARNINGS: true | |
RSPM: ${{ matrix.config.rspm }} | |
GITHUB_PAT: ${{ secrets.GITHUB_TOKEN }} | |
API_KEY: ${{ secrets.API_KEY }} | |
steps: | |
- uses: actions/checkout@v2 | |
- uses: r-lib/actions/setup-r@v2 | |
with: | |
r-version: ${{ matrix.config.r }} | |
http-user-agent: ${{ matrix.config.http-user-agent }} | |
- uses: r-lib/actions/setup-pandoc@v2 | |
- name: install libcurl | |
run: sudo apt install libcurl4-openssl-dev libssl-dev libharfbuzz-dev libfribidi-dev | |
- name: Query dependencies | |
run: | | |
install.packages('remotes') | |
install.packages('sessioninfo') | |
saveRDS(remotes::dev_package_deps(dependencies = TRUE), ".github/depends.Rds", version = 2) | |
writeLines(sprintf("R-%i.%i", getRversion()$major, getRversion()$minor), ".github/R-version") | |
shell: Rscript {0} | |
- name: Cache R packages | |
uses: actions/cache@v1 | |
with: | |
path: ${{ env.R_LIBS_USER }} | |
key: ${{ runner.os }}-${{ hashFiles('.github/R-version') }}-1-${{ hashFiles('.github/depends.Rds') }} | |
restore-keys: ${{ runner.os }}-${{ hashFiles('.github/R-version') }}-1- | |
- name: Install dependencies | |
run: | | |
remotes::install_deps(dependencies = TRUE) | |
shell: Rscript {0} | |
- name: Generate data | |
run: | | |
source("R/write-csvs-for-facility-map.R") | |
shell: Rscript {0} | |
- name: Commit files | |
run: | | |
git config --local user.email "actions@github.com" | |
git config --local user.name "GitHub Actions" | |
git add --all | |
git commit -am "add data" | |
git push | |
- name: Session info | |
run: | | |
options(width = 100) | |
pkgs <- installed.packages()[, "Package"] | |
sessioninfo::session_info(pkgs, include_base = TRUE) | |
shell: Rscript {0} |