Merge pull request #14 from simernes/master

Setting Hetero to 0 for cases when extraHetero is <= 0 and Hetero is never set
VanLoo-lab · Jul 10, 2017 · 2313352 · 2313352
2 parents 13a5f3c + a7fa9bb
commit 2313352
Showing 1 changed file with 2 additions and 0 deletions.
diff --git a/ASCAT/R/ascat.R b/ASCAT/R/ascat.R
@@ -2438,6 +2438,8 @@ ascat.predictGermlineGenotypes = function(ASCATobj, platform = "AffySNP6") {
     Undecided = sum(is.na(Hom))
 
     extraHetero = round(min(proportionHetero * length(Tumor_BAF_noNA),Undecided-proportionOpen*length(Tumor_BAF_noNA)))
+
+	Hetero = 0
 
     if(extraHetero>0) {