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@YounisLab

YounisLab

https://www.qatar.cmu.edu/directory/ihab-younis/

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  1. splicing-analysis splicing-analysis Public

    Computes read coverage across exon-intron, intron-exon and flanking exon-exon junctions for a given .bam file.

    Python 1

  2. rnaseq-pipeline rnaseq-pipeline Public

    Nextflow pipeline that runs STAR, stringtie and splicing-analysis.

    Nextflow 1 1

  3. scripts scripts Public

    Python 1

  4. genome-db genome-db Public

    JavaScript 1

  5. docs docs Public

    Virtual repo to hold YounisLab docs in the wiki

    1

  6. galaxy-upload galaxy-upload Public

    Uploads bigwig and bed files to https://usegalaxy.org and generates links to view in UCSC genome browser.

    Python

Repositories

Showing 8 of 8 repositories
  • splicing-analysis Public

    Computes read coverage across exon-intron, intron-exon and flanking exon-exon junctions for a given .bam file.

    YounisLab/splicing-analysis’s past year of commit activity
    Python 1 0 0 1 Updated Jun 21, 2022
  • mi-INTs-db-frontend Public
    YounisLab/mi-INTs-db-frontend’s past year of commit activity
    TypeScript 0 0 0 0 Updated Dec 2, 2021
  • mi-INTS-db-backend Public
    YounisLab/mi-INTS-db-backend’s past year of commit activity
    Python 0 0 0 0 Updated Dec 2, 2021
  • genome-db Public
    YounisLab/genome-db’s past year of commit activity
    JavaScript 1 0 3 0 Updated Oct 24, 2021
  • rnaseq-pipeline Public

    Nextflow pipeline that runs STAR, stringtie and splicing-analysis.

    YounisLab/rnaseq-pipeline’s past year of commit activity
    Nextflow 1 1 0 0 Updated Oct 16, 2021
  • docs Public

    Virtual repo to hold YounisLab docs in the wiki

    YounisLab/docs’s past year of commit activity
    1 0 0 0 Updated Apr 11, 2021
  • scripts Public
    YounisLab/scripts’s past year of commit activity
    Python 1 0 0 1 Updated Nov 24, 2020
  • galaxy-upload Public

    Uploads bigwig and bed files to https://usegalaxy.org and generates links to view in UCSC genome browser.

    YounisLab/galaxy-upload’s past year of commit activity
    Python 0 0 0 0 Updated Mar 24, 2020

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