update

news/index.html

@@ -212,7 +212,7 @@ <h1 class="title">
 <p><strong><font color="green">Jun 2024</font></strong>: 余光创获得2024年广东省研究生教育创新计划项目资助（项目批准号：2024SFKC_019）；立项类型：研究生示范课程；项目名称：生物信息学。</p>
 <p><strong><font color="green">May 2024</font></strong>: <a href="https://www.smu.edu.cn/info/1251/46529.htm"  class="external-link" target="_blank" rel="noopener">我校入选教育部“101计划”生物信息学虚拟教研室</a>，王倩雯作为代表接受授牌。</p>
 <p><strong><font color="green">May 2024</font></strong>: <a href="https://www.smu.edu.cn/info/1139/45719.htm"  class="external-link" target="_blank" rel="noopener">CCF（中国计算机学会）开源创新大赛暨第二届Bio-OS开源开放大赛在我校启动</a>，余光创主持开幕式，会议同时成立了【南方医科大学Bio-OS开源俱乐部】。</p>
-<p><strong><font color="green">May 2024</font></strong>: 恭喜谢汶琴、李林（留课题组）顺利通过毕业答辩。</p>
+<p><strong><font color="green">May 2024</font></strong>: 恭喜谢汶琴、李林顺利通过毕业答辩。</p>
 <p><strong><font color="green">May 2024</font></strong>: 余光创带领生物信息学系<a href="https://mp.weixin.qq.com/s/cPgbzFhj-_QkDzkMpeTC2Q"  class="external-link" target="_blank" rel="noopener">21级学生参观广州国家实验室</a>。</p>
 <p><strong><font color="green">May 2024</font></strong>: 📝 <a href="https://doi.org/10.1016/j.xinn.2024.100637"  class="external-link" target="_blank" rel="noopener">Decoding the Brain: Unveiling Comprehensive Cellular Atlases through Multiomics Mega Data</a> 发表在<em><strong>The Innovation</strong></em>期刊，恭喜王倩雯。</p>
 <p><strong><font color="green">Apr 2024</font></strong>: 雷峰网访谈：<a href="https://mp.weixin.qq.com/s/I7ig47i6mHNNXQkrfpO5VQ"  class="external-link" target="_blank" rel="noopener">专访南医大生信系主任余光创：没有哪个专业绝对优越，生信人做好「工具人」也不简单</a></p>
@@ -262,7 +262,7 @@ <h1 class="title">
 </ul>
 <p><strong><font color="green">Jun 2023</font></strong>: 🎉 2022年影响因子发布，The Innovation期刊获得首个影响因子 (32.1，11月校正后为33.1)，课题组发表的<a href="https://doi.org/10.1016/j.xinn.2021.100141"  class="external-link" target="_blank" rel="noopener">文章</a> 为期刊的影响因子贡献了9+分。</p>
 <p><strong><font color="green">May 2023</font></strong>: 余光创在2023肠道大会iMeta作者论坛上作特邀报告（<a href="https://mp.weixin.qq.com/s/7b6sPiKbLZ7ZsixhOySjqg"  class="external-link" target="_blank" rel="noopener">PPT</a>）。</p>
-<p><strong><font color="green">May 2023</font></strong>: 🎉 恭喜吴天志顺利通过博士生答辩，恭喜郭平凡和唐文丽（留课题组）顺利通过硕士生答辩。</p>
+<p><strong><font color="green">May 2023</font></strong>: 🎉 恭喜吴天志顺利通过博士生答辩，恭喜郭平凡和唐文丽顺利通过硕士生答辩。</p>
 <p><strong><font color="green">May 2023</font></strong>: 余光创在第九届全国计算生物与生物信息学大会上作特邀报告。</p>
 <p><strong><font color="green">Apr 2023</font></strong>: 余光创在首届TICSSO国际单细胞及空间组学大会上作报告，并主持分论坛5（单细胞科研探索创新论坛）。</p>
 <p><strong><font color="green">Apr 2023</font></strong>: 🌹 祝贺王芮和邓琳两位同学成功上岸，加入课题组。</p>

publications/index.html

@@ -182,6 +182,7 @@ <h2 id="i-classfa-fa-calendar-fa-1x-aria-hiddentruei-2024">
 <li>S Xu<sup>#</sup>, E Hu<sup>#</sup>, Y Cai<sup>#</sup>, Z Xie<sup>#</sup>, X Luo<sup>#</sup>, L Zhan, W Tang, Q Wang, B Liu, R Wang, W Xie, T Wu, L Xie, <strong>G Yu</strong><sup>*</sup>. <a href="https://www.nature.com/articles/s41596-024-01020-z"  class="external-link" target="_blank" rel="noopener">Using clusterProfiler to characterise Multi-Omics Data</a>. <strong><em>Nature Protocols</em></strong>. 2024, accepted.</li>
 <li>Y Chen<sup>#</sup>, LN He<sup>#</sup>, Y Zhang, J Gong, S Xu, Y Shu, D Zhang<sup>*</sup>, <strong>G Yu</strong><sup>*</sup>, Z Zuo<sup>*</sup>. <a href="http://doi.org/10.1002/imt2.229"  class="external-link" target="_blank" rel="noopener">tigeR: Tumor Immunotherapy Gene Expression Data Analysis R package</a>. <strong><em>iMeta</em></strong>. 2024, X(X):e229.</li>
 <li>D Wang, G Chen, L Li, S Wen, Z Xie, X Luo, L Zhan, S Xu, J Li, R Wang, Q Wang<sup>*</sup>, <strong>G Yu</strong><sup>*</sup>. <a href="https://journals.lww.com/cmj/fulltext/2024/08200/reducing_language_barriers,_promoting_information.7.aspx"  class="external-link" target="_blank" rel="noopener">Reducing language barriers, promoting information absorption, and communication using <em>fanyi</em></a>. <strong><em>Chinese Medical Journal</em></strong>. 2024, 137(16):1950-1956.</li>
+<li>Z Miao<sup>#</sup>, T Tian<sup>#</sup>, W Chen<sup>#</sup>, Q Wang<sup>#</sup>, L Ma<sup>#</sup>, D Zhang<sup>#</sup>, M Xie<sup>#</sup>, Z Yu<sup>#</sup>, X Guo, G Bai, S Zhao, X Chen, W Wang, Y Gao, S Guo<sup>*</sup>, M Luo<sup>*</sup>, L Yuan<sup>*</sup>, C Tian<sup>*</sup>, L Wu<sup>*</sup>, <strong>G Yu</strong><sup>*</sup>, D Zhang<sup>*</sup>, S Sun<sup>*</sup>. <a href="" >Spatial Resolved Transcriptomics: Computational Insights into Gene Transcription Across Tissue and Organ Architecture in Diverse Applications</a>. <strong><em>The Innovation Life</em></strong>. 2024, 2(4):100097.</li>
 <li>XK Ma<sup>#</sup>, Y Yu<sup>#</sup>, T Huang<sup>#</sup><sup>*</sup>, D Zhang, C Tian, W Tang, M Luo, P Du<sup>*</sup>, <strong>G Yu</strong><sup>*</sup>, L Yang<sup>*</sup>. <a href="https://www.the-innovation.org/article/doi/10.59717/j.xinn-life.2024.100083"  class="external-link" target="_blank" rel="noopener">Bioinformatics Software Development: principles and future directions</a>. <strong><em>The Innovation Life</em></strong>. 2024, 2(3):100083.</li>
 <li>Y Yang<sup>#</sup>, S Xu<sup>#</sup>, Y Hong, Y Cai, W Tang, J Wang, B Shen<sup>*</sup>, H Zong<sup>*</sup>, <strong>G Yu</strong><sup>*</sup>. <a href="https://doi.org/10.59717/j.xinn-life.2024.100079"  class="external-link" target="_blank" rel="noopener">Computational modeling for medical data: from data collection to knowledge discovery</a>. <strong><em>The Innovation Life</em></strong>. 2024, 2(3):100079.</li>
 <li>L Zhan<sup>#</sup>, X Luo<sup>#</sup>, W Xie<sup>#</sup>, XA Zhu<sup>#</sup>, Z Xie, J Lin, L Li, W Tang, R Wang, L Deng, Y Liao, B Liu, Y Cai, Q Wang, S Xu<sup>*</sup>, <strong>G Yu</strong><sup>*</sup>. <a href="https://www.sciencedirect.com/science/article/pii/S167385272400033X"  class="external-link" target="_blank" rel="noopener">shinyTempSignal: an R shiny application for exploring temporal and other phylogenetic signals</a>. <strong><em>Journal of Genetics and Genomics</em></strong>. 2024, 51(7):762-768.</li>