pytomo

Tools for seismic data processing and tomography in Python. Use dsmpy for exact 1-D waveform computation.
The documentation with several usage examples can be found here.

INSTALLATION

Preferred method: dependencies using conda and building from source

1. Install dsmpy. In the process, you should have created a dsm conda environment.
2. Clone the pytomo repository

git clone https://github.com/afeborgeaud/pytomo

3. Update the dsm conda environment (from step 1):

conda env update -n dsm --file environment.yml --prune

5. Install pytomo. /path/to/pytomo/ is the path to the local pytomo git repository:

conda develop -n dsm /path/to/pytomo/

Requirements

• Libraries for Python dev

sudo apt-get install python3-dev

• You might have to install GEOS lib dev, which are required by cartopy

sudo apt-get install libgeos-dev

sudo apt-get install libproj-dev proj-data proj-bin

Using pip (building from source)

1. Clone the pytomo repository

git clone https://github.com/afeborgeaud/pytomo

2. (Optional) You may want to install pytomo in a virtual environment. If so, do

python3 -m venv venv
source activate ./venv/bin/activate

3. Install build, a PEP517 package builder

pip install build

4. To build the pytomo package, from the root directory pytomo run

python -m build .

5. This creates .whl and .gz.tar dist files in the dist directory. Now pydsm can be installed with

pip install dist/*.whl

or

pip install dist/*.tar.gz