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@alexandrovteam

Tools developed by the Alexandrov Team, EMBL / UCSD

Mainly for processing and analysis of mass spectrometry and imaging MS data

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  1. pyimzML pyimzML Public

    A parser to read .imzML files with python

    Python 38 19

  2. curatr curatr Public

    JavaScript 14 3

Repositories

Showing 10 of 30 repositories
  • S2IsoMEr Public

    Spatial and Single cell Isomeric Metabolite enrichment in R

    alexandrovteam/S2IsoMEr’s past year of commit activity
    R 1 1 0 0 Updated Feb 26, 2025
  • S2IsoMErData Public

    Data required for S2IsoMEr R package. Data includes enrichment backgrounds, isomeric/isobaric ions, LION lipid sets and S2IsoMEr example objects.

    alexandrovteam/S2IsoMErData’s past year of commit activity
    0 MIT 0 0 0 Updated Feb 26, 2025
  • pyimzML Public

    A parser to read .imzML files with python

    alexandrovteam/pyimzML’s past year of commit activity
    Python 38 Apache-2.0 19 2 1 Updated Nov 4, 2024
  • SpaceM Public
    alexandrovteam/SpaceM’s past year of commit activity
    Python 13 Apache-2.0 5 0 4 Updated Sep 13, 2024
  • metaspace-ml-context-explorer Public

    METASPACE-ML Context Explorer

    alexandrovteam/metaspace-ml-context-explorer’s past year of commit activity
    R 1 MIT 0 0 0 Updated Sep 4, 2024
  • predicting-APMALDI-response Public

    Predict AP-MALDI Response using Machine Learning

    alexandrovteam/predicting-APMALDI-response’s past year of commit activity
    Jupyter Notebook 1 MIT 0 0 0 Updated Apr 7, 2023
  • curatr Public
    alexandrovteam/curatr’s past year of commit activity
    JavaScript 14 Apache-2.0 3 1 8 Updated Dec 27, 2022
  • ims-direct-control Public
    alexandrovteam/ims-direct-control’s past year of commit activity
    Jupyter Notebook 3 MIT 1 1 0 Updated Jul 4, 2022
  • microbial-metaspace Public
    alexandrovteam/microbial-metaspace’s past year of commit activity
    Python 0 0 0 0 Updated Apr 20, 2021
  • DeepCycle Public Forked from alexander-rakhlin/DeepCycle

    code for DeepCycle paper

    alexandrovteam/DeepCycle’s past year of commit activity
    Jupyter Notebook 9 3 0 0 Updated Oct 7, 2020
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