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Update fastapi requirement from ==0.110.* to ==0.111.* in /api #37

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merged 5 commits into from
May 31, 2024
Merged

Update fastapi requirement from ==0.110.* to ==0.111.* in /api #37

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a7ffc1f
Update fastapi requirement from ==0.110.* to ==0.111.* in /api
dependabot[bot] May 31, 2024
07bab19
Auto-updated deps lock files
mluypaert May 31, 2024
b997502
Implemented use of new fastapi-cli
mluypaert May 31, 2024
3048a64
Removed direct uvicorn dependency in favor of fastapi sub-dependency
mluypaert May 31, 2024
440ea79
Fixed API fastapi app path
mluypaert May 31, 2024
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2 changes: 1 addition & 1 deletion api/Dockerfile
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Expand Up @@ -28,4 +28,4 @@ ENV API_EXECUTION_ENV="aws"
ENV API_PIPELINE_IMAGE_TAG="main"

# Start the API server application
CMD [ "uvicorn", "main:app", "--host", "0.0.0.0", "--port", "8080"]
CMD [ "fastapi", "run", "main.py", "--host", "0.0.0.0", "--port", "8080"]
2 changes: 1 addition & 1 deletion api/Makefile
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Expand Up @@ -34,7 +34,7 @@ nextflow.config:
run-api-server-dev: python-dependencies nextflow.sh protein-msa.nf nextflow.config
@export API_RESULTS_PATH_PREFIX="`pwd`/" && \
export API_EXECUTION_ENV="local" && \
uvicorn --app-dir src/ --reload main:app
fastapi dev src/main.py

.venv/:
python3.12 -m venv .venv/
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5 changes: 2 additions & 3 deletions api/pyproject.toml
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Expand Up @@ -9,9 +9,8 @@ authors = [

requires-python = "==3.12.*"
dependencies = [
"fastapi==0.110.*",
"smart-open[s3]==7.0.*",
"uvicorn[standard]==0.29.*"
"fastapi==0.111.*",
"smart-open[s3]==7.0.*"
]

[project.optional-dependencies]
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