refactor: eliminate global state dependencies with explicit injection

[kangeunchan]

Enhancement Description

Eliminate global state dependencies by replacing global logger/registry usage with explicit dependency injection.

Summary

This PR removes global mutable dependencies from critical paths and makes initialization/wiring explicit.

Previously, global dependencies created hidden coupling:

• logger usage depended on global defaults in multiple packages
• registry/service lookups were not fully explicit
• tests required broader setup due to implicit shared state

Now collaborators are passed explicitly through constructors/wiring.

What Changed

1) Replaced global logger usage with injected loggers

Updated across application/daemon/infrastructure paths including:

• internal/application/service.go
• internal/application/version/service.go
• internal/daemon/server/server.go
• internal/infrastructure/* (targeted logger call sites)

2) Replaced global registry access with explicit dependencies

Updated daemon/server and related wiring:

• internal/daemon/server/network_service.go
• internal/daemon/server/plugins.go
• internal/daemon/server/wiring.go

3) Updated composition roots and startup wiring

Updated:

• cmd/devnet-builder/main.go
• internal/di/container.go
• internal/di/container_v2.go

4) Tests

Added/updated tests:

• internal/daemon/server/network_service_test.go
• internal/daemon/server/wiring_test.go
• tests/unit/resume_usecase_test.go

Why This Is Needed

This is a reliability and testability refactor.
Removing global state improves isolation, reduces hidden side effects, and clarifies lifecycle boundaries.

Behavior Notes / Regression Impact

No intentional feature/CLI behavior change.
Initialization paths are now explicit and easier to reason about.

Validation Performed

• go test ./internal/daemon/server/...
• go test ./internal/application/...
• go test ./...
• golangci-lint run