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anonymousDog12 · Oct 27, 2018 · 213a633 · 213a633
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diff --git a/ActiveContour.ipynb b/ActiveContour.ipynb
diff --git a/PCA_autoencoder.ipynb b/PCA_autoencoder.ipynb
diff --git a/README.md b/README.md
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+# Cardiac MR Left Ventricle Segmentation
+UCLA-CS269 Project -- Cardiac MR Left Ventricle Segmentation Challenge.
+
+### Abstraction
+Image segmentation of the left ventricle from cardiac magnetic resonance imaging is a crucial but tedious step for clinical cardiac health diagnosis. In this project, we proposed to use convolutional neural network combined with deformable model to conduct medical image segmentation. A three-step approach is proposed to deal with the low-contrast nature of medical image and relative small size of available data. Finally, the performance of the segmentation algorithm is evaluated from both quantitative and qualitative aspects.  
+
+
+### Members
+Qi Qu  
+Jingxi Yu  
+Changyu Yan  
+Sha Liu  
+
+### Dataset
+Data could be downloaded on this site after registering http://smial.sri.utoronto.ca/LV_Challenge/Home.html. 
+All data is expected to be released to ../Data/
+
+### Codes 
+ROI_detection.ipynb shows the process of ROI detection and also how to loads and prepare the data in this challenge.  
+StackedAE.ipynb && PCA_autoencoder.ipynb shows the process of shape prior inference.  
+SAE+ActiveContour.ipynb shows the last step of computing the contour.  
+
diff --git a/ROI_detection.ipynb b/ROI_detection.ipynb
diff --git a/SAE+ActiveContour.ipynb b/SAE+ActiveContour.ipynb
diff --git a/SAX_series.txt b/SAX_series.txt
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+# challenge training
+SC-HF-I-1: 0004
+SC-HF-I-2: 0106
+SC-HF-I-4: 0116
+SC-HF-I-40: 0134
+SC-HF-NI-3: 0379
+SC-HF-NI-4: 0501
+SC-HF-NI-34: 0446
+SC-HF-NI-36: 0474
+SC-HYP-1: 0550
+SC-HYP-3: 0650
+SC-HYP-38: 0734
+SC-HYP-40: 0755
+SC-N-2: 0898
+SC-N-3: 0915
+SC-N-40: 0944
+# challenge online
+SC-HF-I-9: 0241
+SC-HF-I-10: 0024
+SC-HF-I-11: 0043
+SC-HF-I-12: 0062
+SC-HF-NI-12: 0286
+SC-HF-NI-13: 0304
+SC-HF-NI-14: 0331
+SC-HF-NI-15: 0359
+SC-HYP-9: 0003
+SC-HYP-10: 0579
+SC-HYP-11: 0601
+SC-HYP-12: 0629
+SC-N-9: 1031
+SC-N-10: 0851
+SC-N-11: 0878
+# challenge validation
+SC-HF-I-5: 0156
+SC-HF-I-6: 0180
+SC-HF-I-7: 0209
+SC-HF-I-8: 0226
+SC-HF-NI-7: 0523
+SC-HF-NI-11: 0270
+SC-HF-NI-31: 0401
+SC-HF-NI-33: 0424
+SC-HYP-6: 0767
+SC-HYP-7: 0007
+SC-HYP-8: 0796
+SC-HYP-37: 0702
+SC-N-5: 0963
+SC-N-6: 0984
+SC-N-7: 1009