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Updating anvil-edge README for edge-24-09-23-06-12-1
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actions-user committed Sep 23, 2024
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2 changes: 1 addition & 1 deletion reports/anvil-edge/README.md

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10 changes: 5 additions & 5 deletions reports/anvil-edge/tool-tests/chunks.json
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"date2": "Sun Sep 15 18:32:12 2024"
},
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"date1": "Mon Sep 16 06:27:02 2024",
"tools": "https://github.com/anvilproject/galaxy-tests/blob/main/reports/anvil-edge/tool-tests/edge-24-09-16-06-12-1/tools.yml",
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"date2": "Mon Sep 09 06:26:24 2024"
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"date1": "Mon Sep 23 06:26:44 2024",
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"date2": "Mon Sep 16 06:27:02 2024"
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{
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"date1": "Mon Sep 23 06:26:44 2024",
"tools": "https://github.com/anvilproject/galaxy-tests/blob/main/reports/anvil-edge/tool-tests/edge-24-09-23-06-12-1/tools.yml"
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25 changes: 25 additions & 0 deletions reports/anvil-edge/tool-tests/edge-24-09-23-06-12-1/chunk.txt
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-t unicycler --tool-version 9e3e80cc4ad4
-t deeptools_bam_compare --tool-version e821645ef8fc
-t cutadapt --tool-version 093678460093
-t cutadapt --tool-version 135b80fb1ac2
-t fastqc --tool-version 3d0c7bdf12f5
-t fastqc --tool-version e7b2202befea
-t rna_starsolo --tool-version eec9494fdafa
-t rna_starsolo --tool-version 79b885ce78d7
-t poretools_hist --tool-version 5a82eb9e1b89
-t picard --tool-version b502c227b5e6
-t samtools_view --tool-version b72793637686
-t samtools_split --tool-version 135c85f4cfaf
-t sam_merge --tool-version 1977f1637890
-t dropletutils_read_10x --tool-version ca62f52e0d7f
-t scater_normalize --tool-version 946179ef029c
-t anndata_ops --tool-version 54f1212d26ac
-t anndata_ops --tool-version 6aa025ea64d3
-t scanpy_plot_embed --tool-version 99dd7baf9e23
-t scanpy_plot_embed --tool-version a8ef4bc35839
-t jq --tool-version 5ff75eb1a893
-t snpsift_dbnsfp --tool-version 4e21e4f2bc48
-t bcftools_plugin_counts --tool-version 4813f99d81b7
-t bcftools_view --tool-version 23680a42e149
-t vcfcheck --tool-version 2968c6916579
-t vcfdistance --tool-version 5822b40f3037
Original file line number Diff line number Diff line change
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Original file line number Diff line number Diff line change
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Original file line number Diff line number Diff line change
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Original file line number Diff line number Diff line change
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"params": {
"__input_ext": "\"sam\"",
"dbkey": "\"?\"",
"chromInfo": "\"/cvmfs/data.galaxyproject.org/managed/len/ucsc/?.len\"",
"addref_cond": "{\"__current_case__\": 0, \"addref_select\": \"no\"}",
"mode": "{\"__current_case__\": 1, \"filter_config\": {\"cigarcons\": \"\", \"cond_region\": {\"__current_case__\": 0, \"select_region\": \"no\"}, \"cond_rg\": {\"__current_case__\": 0, \"select_rg\": \"no\"}, \"exclusive_filter\": null, \"exclusive_filter_all\": null, \"inclusive_filter\": null, \"library\": null, \"quality\": \"\"}, \"output_options\": {\"__current_case__\": 0, \"adv_output\": {\"collapsecigar\": false, \"readtags\": []}, \"complementary_output\": false, \"output_format\": {\"__current_case__\": 0, \"oformat\": \"input\"}, \"reads_report_type\": \"retained\"}, \"outtype\": \"selected_reads\", \"subsample_config\": {\"subsampling_mode\": {\"__current_case__\": 1, \"seed\": \"\", \"select_subsample\": \"target\", \"target\": \"20\"}}}"
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Original file line number Diff line number Diff line change
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Original file line number Diff line number Diff line change
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