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Updating anvil-edge README for edge-24-09-13-18-17-1
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7 changes: 7 additions & 0 deletions
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reports/anvil-edge/tool-tests/edge-24-09-13-18-17-1/chunk.json
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| Original file line number | Diff line number | Diff line change |
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| @@ -0,0 +1,7 @@ | ||
| { | ||
| "9": { | ||
| "run1": "https://htmlpreview.github.io/?https://github.com/anvilproject/galaxy-tests/blob/main/reports/anvil-edge/tool-tests/edge-24-09-13-18-17-1/results.html", | ||
| "date1": "Fri Sep 13 18:32:19 2024", | ||
| "tools": "https://github.com/anvilproject/galaxy-tests/blob/main/reports/anvil-edge/tool-tests/edge-24-09-13-18-17-1/tools.yml" | ||
| } | ||
| } |
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reports/anvil-edge/tool-tests/edge-24-09-13-18-17-1/chunk.txt
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| Original file line number | Diff line number | Diff line change |
|---|---|---|
| @@ -0,0 +1,26 @@ | ||
| -t datamash_reverse --tool-version f198773344e4 | ||
| -t deeptools_plot_enrichment --tool-version e65d16fb2724 | ||
| -t umi_tools_count --tool-version 8250ea3a1501 | ||
| -t umi_tools_count --tool-version b557acca0b56 | ||
| -t umi_tools_count --tool-version a535cf1e5da4 | ||
| -t bowtie2 --tool-version 09b2cdb7ace5 | ||
| -t medaka_consensus_pipeline --tool-version a7228a7ea146 | ||
| -t poretools_stats --tool-version 4b17acf9b6ab | ||
| -t stringtie --tool-version 1ebd14235b92 | ||
| -t samtools_markdup --tool-version 83b8e36e9cbe | ||
| -t samtools_markdup --tool-version b5527cc104ab | ||
| -t bamtools_filter --tool-version cb20f99fd45b | ||
| -t bamtools_filter --tool-version bd735cae4ce6 | ||
| -t anndata_manipulate --tool-version 9bd945a03d7b | ||
| -t anndata_manipulate --tool-version 3d748954434b | ||
| -t salmonquantmerge --tool-version 88c07fc4024c | ||
| -t scanpy_remove_confounders --tool-version bf2017df9837 | ||
| -t scanpy_compute_graph --tool-version 2401808e20e8 | ||
| -t scanpy_compute_graph --tool-version a58d4166805b | ||
| -t split_file_on_column --tool-version 37a53100b67e | ||
| -t lofreq_indelqual --tool-version 426d707dfc47 | ||
| -t bcftools_norm --tool-version c077f71d351f | ||
| -t bcftools_plugin_fill_tags --tool-version bf7d6acd9884 | ||
| -t vcfallelicprimitives --tool-version 57a16b310fe8 | ||
| -t vcfprimers --tool-version 17096387c0e6 | ||
| -t ivar_filtervariants --tool-version 7fe36019c073 |
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45
reports/anvil-edge/tool-tests/edge-24-09-13-18-17-1/errors/0a0c97e839d37f86.json
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| Original file line number | Diff line number | Diff line change |
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| @@ -0,0 +1,45 @@ | ||
| { | ||
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45 changes: 45 additions & 0 deletions
45
reports/anvil-edge/tool-tests/edge-24-09-13-18-17-1/errors/182b264af6877d55.json
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| Original file line number | Diff line number | Diff line change |
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| @@ -0,0 +1,45 @@ | ||
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45
reports/anvil-edge/tool-tests/edge-24-09-13-18-17-1/errors/199f4f79ab97492c.json
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| Original file line number | Diff line number | Diff line change |
|---|---|---|
| @@ -0,0 +1,45 @@ | ||
| { | ||
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| "id": "199f4f79ab97492c", | ||
| "history_id": "469445232d8b90ee", | ||
| "tool_id": "upload1", | ||
| "state": "error", | ||
| "exit_code": null, | ||
| "create_time": "2024-09-13T19:14:58.006303", | ||
| "update_time": "2024-09-13T19:15:09.227797", | ||
| "galaxy_version": "24.1", | ||
| "external_id": "gxy-sgfpv", | ||
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| "command_line": "python '/galaxy/server/database/tools/data_source/upload.py' '/galaxy/server' '/galaxy/server/database/jobs_directory/000/153/registry.xml' '/galaxy/server/database/jobs_directory/000/153/upload_params.json' '173:/galaxy/server/database/objects/2/c/d/dataset_2cda374b-1924-47b5-8eb0-064fa1d4ebf4_files:/galaxy/server/database/objects/2/c/d/dataset_2cda374b-1924-47b5-8eb0-064fa1d4ebf4.dat'", | ||
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| "dbkey": "\"?\"", | ||
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45 changes: 45 additions & 0 deletions
45
reports/anvil-edge/tool-tests/edge-24-09-13-18-17-1/errors/24096e0e355bcdae.json
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| Original file line number | Diff line number | Diff line change |
|---|---|---|
| @@ -0,0 +1,45 @@ | ||
| { | ||
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| "create_time": "2024-09-13T18:40:54.707924", | ||
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| "galaxy_version": "24.1", | ||
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| "command_line": "python '/galaxy/server/database/tools/data_source/upload.py' '/galaxy/server' '/galaxy/server/database/jobs_directory/000/24/registry.xml' '/galaxy/server/database/jobs_directory/000/24/upload_params.json' '25:/galaxy/server/database/objects/4/3/4/dataset_434b0d3b-b670-471e-813f-cb31b03d8b58_files:/galaxy/server/database/objects/4/3/4/dataset_434b0d3b-b670-471e-813f-cb31b03d8b58.dat'", | ||
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45 changes: 45 additions & 0 deletions
45
reports/anvil-edge/tool-tests/edge-24-09-13-18-17-1/errors/240ce7e587dc93bd.json
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| Original file line number | Diff line number | Diff line change |
|---|---|---|
| @@ -0,0 +1,45 @@ | ||
| { | ||
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45 changes: 45 additions & 0 deletions
45
reports/anvil-edge/tool-tests/edge-24-09-13-18-17-1/errors/24277b0c223ab59b.json
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| Original file line number | Diff line number | Diff line change |
|---|---|---|
| @@ -0,0 +1,45 @@ | ||
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45 changes: 45 additions & 0 deletions
45
reports/anvil-edge/tool-tests/edge-24-09-13-18-17-1/errors/266fafe30c7d2cdd.json
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| "dbkey": "\"?\"", | ||
| "force_composite": "\"false\"", | ||
| "files": "[{\"NAME\": \"lofreq-in1.bam\", \"__index__\": 0, \"auto_decompress\": \"Yes\", \"dbkey\": \"\", \"file_data\": \"/galaxy/server/database/tmp/upload_file_data_cx6_mvtv\", \"file_type\": \"\", \"ftp_files\": null, \"space_to_tab\": null, \"to_posix_lines\": \"Yes\", \"url_paste\": null, \"uuid\": null}]", | ||
| "file_count": "\"auto\"", | ||
| "file_type": "\"bam\"" | ||
| }, | ||
| "inputs": {}, | ||
| "outputs": { | ||
| "output0": { | ||
| "id": "9bffd3f050d538c5", | ||
| "src": "hda", | ||
| "uuid": "3219dee0-dd99-438a-a41c-d27ceee48f9c" | ||
| } | ||
| }, | ||
| "copied_from_job_id": null, | ||
| "output_collections": {}, | ||
| "tool_stdout": "", | ||
| "tool_stderr": "", | ||
| "job_stdout": null, | ||
| "job_stderr": null, | ||
| "stdout": "", | ||
| "stderr": "", | ||
| "job_messages": null, | ||
| "dependencies": [], | ||
| "job_metrics": [] | ||
| } |
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