Updating anvil-edge README for edge-24-09-25-18-17-1

anvilproject · Sep 25, 2024 · 65fde16 · 65fde16
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diff --git a/reports/anvil-edge/README.md b/reports/anvil-edge/README.md
diff --git a/reports/anvil-edge/tool-tests/chunks.json b/reports/anvil-edge/tool-tests/chunks.json
@@ -28,11 +28,11 @@
         "date2": "Wed Sep 18 06:26:06 2024"
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-        "date1": "Wed Sep 18 18:32:06 2024",
-        "tools": "https://github.com/anvilproject/galaxy-tests/blob/main/reports/anvil-edge/tool-tests/edge-24-09-18-18-17-1/tools.yml",
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-        "date2": "Wed Sep 11 18:32:01 2024"
+        "run1": "https://htmlpreview.github.io/?https://github.com/anvilproject/galaxy-tests/blob/main/reports/anvil-edge/tool-tests/edge-24-09-25-18-17-1/results.html",
+        "date1": "Wed Sep 25 18:31:33 2024",
+        "tools": "https://github.com/anvilproject/galaxy-tests/blob/main/reports/anvil-edge/tool-tests/edge-24-09-25-18-17-1/tools.yml",
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     "6": {
         "run1": "https://htmlpreview.github.io/?https://github.com/anvilproject/galaxy-tests/blob/main/reports/anvil-edge/tool-tests/edge-24-09-19-06-11-1/results.html",

diff --git a/reports/anvil-edge/tool-tests/edge-24-09-25-18-17-1/chunk.json b/reports/anvil-edge/tool-tests/edge-24-09-25-18-17-1/chunk.json
@@ -0,0 +1,7 @@
+{
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+        "date1": "Wed Sep 25 18:31:33 2024",
+        "tools": "https://github.com/anvilproject/galaxy-tests/blob/main/reports/anvil-edge/tool-tests/edge-24-09-25-18-17-1/tools.yml"
+    }
+}
diff --git a/reports/anvil-edge/tool-tests/edge-24-09-25-18-17-1/chunk.txt b/reports/anvil-edge/tool-tests/edge-24-09-25-18-17-1/chunk.txt
@@ -0,0 +1,25 @@
+-t collapse_collections --tool-version 90981f86000f
+-t deeptools_multi_bam_summary --tool-version 78f405266706
+-t fastq_paired_end_deinterlacer --tool-version f3936d0632cb
+-t circos --tool-version df7356989ac1
+-t mummer_mummer --tool-version 48823c9635a4
+-t porechop --tool-version 93d623d9979c
+-t limma_voom --tool-version 0921444c832d
+-t limma_voom --tool-version d6f5fa4ee473
+-t sam2interval --tool-version 75557c0908a9
+-t samtools_flagstat --tool-version 22970df7a40e
+-t music_construct_eset --tool-version 282819d09a4f
+-t music_construct_eset --tool-version 2cfd0db49bbc
+-t raceid_clustering --tool-version a4b734cd253b
+-t raceid_clustering --tool-version f911a64454fb
+-t scanpy_filter --tool-version b409c2486353
+-t scanpy_normalise_data --tool-version 439f7f939d46
+-t scanpy_normalise_data --tool-version 463d4fa8f5ec
+-t annotatemyids --tool-version 44018dd6b447
+-t annotatemyids --tool-version fe3ca740a485
+-t diff --tool-version 156d0908e232
+-t bcftools_consensus --tool-version d6dc477167f8
+-t bcftools_plugin_impute_info --tool-version 776ad0b21536
+-t bcftools_query --tool-version c9c5718edc19
+-t vcfgeno2haplo --tool-version a3dea556218d
+-t ivar_trim --tool-version db536ad45f28
diff --git a/reports/anvil-edge/tool-tests/edge-24-09-25-18-17-1/errors/10b588686dd359bf.json b/reports/anvil-edge/tool-tests/edge-24-09-25-18-17-1/errors/10b588686dd359bf.json
@@ -0,0 +1,45 @@
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+        "file_type": "\"auto\""
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diff --git a/reports/anvil-edge/tool-tests/edge-24-09-25-18-17-1/errors/10c52727a6cf2bc6.json b/reports/anvil-edge/tool-tests/edge-24-09-25-18-17-1/errors/10c52727a6cf2bc6.json
@@ -0,0 +1,59 @@
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+    "outputs": {
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+            "src": "hda",
+            "uuid": "98993230-2033-44e0-a793-95e7771ffbb8"
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+    "stdout": "",
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+    "dependencies": [],
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+}
diff --git a/reports/anvil-edge/tool-tests/edge-24-09-25-18-17-1/errors/120c2a079f3eac9d.json b/reports/anvil-edge/tool-tests/edge-24-09-25-18-17-1/errors/120c2a079f3eac9d.json
@@ -0,0 +1,45 @@
+{
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+        "file_count": "\"auto\"",
+        "file_type": "\"auto\""
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+    "outputs": {
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+            "src": "hda",
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+    "stdout": "",
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+    "dependencies": [],
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+}
diff --git a/reports/anvil-edge/tool-tests/edge-24-09-25-18-17-1/errors/198305c58f4c58c0.json b/reports/anvil-edge/tool-tests/edge-24-09-25-18-17-1/errors/198305c58f4c58c0.json
@@ -0,0 +1,60 @@
+{
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+    "galaxy_version": "24.1",
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+    "job_runner_name": null,
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+    "user_email": "tests@fake.org",
+    "command_version": null,
+    "params": {
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+        "dbkey": "\"?\"",
+        "chromInfo": "\"/cvmfs/data.galaxyproject.org/managed/len/ucsc/?.len\"",
+        "expdata": "{\"abstract\": \"An example ExpressionSet\", \"contact\": \"pfermat@lab.not.exist\", \"lab\": \"Francis Galton Lab\", \"name\": \"Pierre Fermat\", \"other\": [{\"__index__\": 0, \"comment\": \"Created in Galaxy\", \"field\": \"notes\"}, {\"__index__\": 1, \"comment\": \"Some other comment\", \"field\": \"general\"}], \"title\": \"Smoking-Cancer Experiment\", \"url\": \"www.lab.not.exist\"}",
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+        "annotation": "\"hgu95av2\""
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+            "uuid": "8c741297-978b-46e6-912a-31e53d279bf9"
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+            "src": "hda",
+            "uuid": "1aab4e58-8554-481b-acd5-5846b64c1eff"
+        }
+    },
+    "outputs": {
+        "out_tab": {
+            "id": "16f084dc7582ea60",
+            "src": "hda",
+            "uuid": "b0d428d0-0bf6-43d9-b7d3-0944d265c156"
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+}
diff --git a/reports/anvil-edge/tool-tests/edge-24-09-25-18-17-1/errors/24f4a942c09aed0a.json b/reports/anvil-edge/tool-tests/edge-24-09-25-18-17-1/errors/24f4a942c09aed0a.json
@@ -0,0 +1,45 @@
+{
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+    "update_time": "2024-09-25T18:43:40.643415",
+    "galaxy_version": "24.1",
+    "external_id": "gxy-9pb4d",
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+    "job_runner_name": null,
+    "command_line": "python '/galaxy/server/database/tools/data_source/upload.py' '/galaxy/server' '/galaxy/server/database/jobs_directory/000/35/registry.xml' '/galaxy/server/database/jobs_directory/000/35/upload_params.json' '48:/galaxy/server/database/objects/2/3/5/dataset_235942e9-02ff-4b64-889f-da59f5fcf00e_files:/galaxy/server/database/objects/2/3/5/dataset_235942e9-02ff-4b64-889f-da59f5fcf00e.dat'",
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+}