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prepare release (#443)
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* Update CHANGELOG.md and version number
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camillebrianceau authored Jun 9, 2023
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28 changes: 28 additions & 0 deletions CHANGELOG.md
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Expand Up @@ -5,6 +5,34 @@ Main changes to this code/ project are documented in this file.
The format is based on [Keep a Changelog](https://keepachangelog.com/en/1.0.0/),
and this project adheres to [Semantic Versioning](https://semver.org/spec/v2.0.0.html).

## ClinicaDL 1.4.0

### Fixed

* Fix `--diagnoses` and `--merged_tsv` option bug in `clinicadl get-labels`
* Fix Pathlib bugs
* Fix `get_tsv_paths` function bug.
* Fix a bug for which it was impossible to use predict without specifying the splits and selection metrics.

### Changed

* Changed default batch size to 8 for `clinicadl predict`
* Changed VAEs main class

### New

* Add `--n_proc` option in `clinicadl generate` pipelines for parallelization.
* Add `--split` to `clinicadl predict`
* Add new VAE networks.
* Add pytorch function to summarize
* Add `--size_reduction` and `--size_reduction_factor` options to `clinicadl train`, `clinicadl predict` and `clinicadl interpret`.
* Add SSIM2D, SSIM3D metrics for VAE.
* Add `--save_latent_space` option to `clinicadl train` and `clinicadl predict`.
* Add `clinicadl generate trvial_motion`
* Add Data augmentation with torchio



## ClinicaDL 1.3.1

### Fixed
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2 changes: 1 addition & 1 deletion pyproject.toml
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@@ -1,6 +1,6 @@
[tool.poetry]
name = "clinicadl"
version = "1.3.1"
version = "1.4.0"
description = "Framework for the reproducible processing of neuroimaging data with deep learning methods"
license = "MIT"
authors = ["ARAMIS Lab"]
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