This repository has custom R functions and scripts used to compare phylogenetic models with and without gene flow as implemented in:
Morales AE, Carstens BC (In Review) Evidence that Myotis lucifugus ‘subspecies’ are five non-sister species, despite gene flow. Systematic Biology.
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Execute analysis with example Dataset
- Example datasets are included here to execute functions, the complete dataset can be found in Dryad
Please send me an email if you have comments.