Made microc_align preemptible an option with 0 as the default

aryeelab · Mar 17, 2024 · 4ddd812 · 4ddd812
1 parent ce9c80c
commit 4ddd812
Showing 1 changed file with 2 additions and 1 deletion.
diff --git a/microc.wdl b/microc.wdl
@@ -142,6 +142,7 @@ task microc_align {
         String memory = "20GB"
         String disk = "100"
         String mapq = "20"
+        Int preemptible = 0
         String chunk_id = basename(fastq_r1, "_R1.fastq.gz")
         File resource_monitor_script
         File top_monitor_script
@@ -197,7 +198,7 @@ task microc_align {
 
     runtime {
         docker: "us-central1-docker.pkg.dev/aryeelab/docker/microc:${image_id}"
-        preemptible: 1
+        preemptible: preemptible
         bootDiskSizeGb: 40
         cpu: bwa_cores
         memory: memory