Heat dist #109

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guillaumehu wants to merge 6 commits into atong01:single_cell_HD from guillaumehu:heat_dist

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guillaumehu commented Mar 1, 2024 •

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Adding the diffusion-based distance used for the single-cell experiment. We approximate the heat kernel with Chebyshev polynomials.

chebyshev approximation
heat kernel + distance
Low rank and exact heat kernel ?
tests

guillaumehu added 6 commits

February 29, 2024 22:13


          add cheb approx & graph & heat dit

705bbc5


          add tests

705b2af


          rm laplacian_from_data

d4e31f2


          change default

7fa245d


          add devices

75c6337


          fix laplacian

d14e4e5

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