Release v0.1.19

.bumpversion.cfg

@@ -1,5 +1,5 @@
 [bumpversion]
-current_version = 0.1.18
+current_version = 0.1.19
 commit = True
 tag = True
 

pyproject.toml

@@ -1,6 +1,6 @@
 [project]
 name = "quickview"
-version = "0.1.18"
+version = "0.1.19"
 description = "An application to explore/analyze data for atmosphere component for E3SM"
 authors = [
     {name = "Kitware Inc."},

quickview/__init__.py

@@ -1,5 +1,5 @@
 """QuickView: Visual Analysis for E3SM Atmosphere Data."""
 
-__version__ = "0.1.18"
+__version__ = "0.1.19"
 __author__ = "Kitware Inc."
 __license__ = "Apache-2.0"

quickview/interface.py

@@ -721,7 +721,7 @@ def ui(self) -> SinglePageWithDrawerLayout:
                         (
                             html.Img(
                                 src=f"data:image/png;base64,{LOGO_BASE64}",
-                                style="height: 40px; width: 80px; border-radius: 4px; margin-bottom: 2px;",
+                                style="height: 30px; width: 60px; border-radius: 4px; margin-bottom: 2px;",
                             ),
                         )
                         html.Span(

quickview/plugins/eam_reader.py

@@ -349,36 +349,24 @@ def _get_cached_area(self, vardata):
     def _load_2d_variable(self, vardata, varmeta, timeInd):
         """Load 2D variable data with optimized operations."""
         # Get data without unnecessary copy
-        data = vardata[varmeta.name][timeInd]
-        # Reshape instead of flatten to avoid copy when possible
-        data = data.reshape(-1)
-        # Create a copy only if we need to modify values
-        if varmeta.fillval is not None:
-            data = data.copy()  # Only copy when needed
-            mask = data == varmeta.fillval
-            data[mask] = np.nan
+        data = vardata[varmeta.name][:].data[timeInd].flatten()
+        data = np.where(data == varmeta.fillval, np.nan, data)
         return data
 
     def _load_3d_slice(self, vardata, varmeta, timeInd, start_idx, end_idx):
         """Load a slice of 3D variable data with optimized operations."""
         # Load full 3D data for time step
-        data = vardata[varmeta.name][timeInd]
-
-        if varmeta.transpose:
-            # Only transpose if needed
-            data = data.T
-
-        # Reshape to 2D (levels, ncells) and extract slice
-        data_reshaped = data.reshape(data.shape[0], -1)
-        slice_data = data_reshaped.flat[start_idx:end_idx]
-
-        # Create a copy for fill value replacement
-        if varmeta.fillval is not None:
-            slice_data = slice_data.copy()
-            mask = slice_data == varmeta.fillval
-            slice_data[mask] = np.nan
-
-        return slice_data
+        if not varmeta.transpose:
+            data = vardata[varmeta.name][:].data[timeInd].flatten()[start_idx:end_idx]
+        else:
+            data = (
+                vardata[varmeta.name][:]
+                .data[timeInd]
+                .transpose()
+                .flatten()[start_idx:end_idx]
+            )
+        data = np.where(data == varmeta.fillval, np.nan, data)
+        return data
 
     def _get_enabled_arrays(self, var_list, selection_obj):
         """Get list of enabled variable names from selection object."""
@@ -477,7 +465,15 @@ def _populate_variable_metadata(self):
             elif varmeta.type == VarType._3Di:
                 self._interface_vars.append(varmeta)
                 self._interface_selection.AddArray(name)
-
+            try:
+                fillval = info.getncattr("_FillValue")
+                varmeta.fillval = fillval
+            except Exception:
+                try:
+                    fillval = info.getncattr("missing_value")
+                    varmeta.fillval = fillval
+                except Exception:
+                    pass
         self._surface_selection.DisableAllArrays()
         self._interface_selection.DisableAllArrays()
         self._midpoint_selection.DisableAllArrays()

quickview/ui/toolbar.py

@@ -292,6 +292,12 @@ def __init__(
                         ):
                             v2.VIcon("mdi-upload")
                     html.Span("Load State")
+            v2.VProgressCircular(
+                bg_color="rgba(0,0,0,0)",
+                indeterminate=("trame__busy",),
+                color="primary",
+                width=3,
+            )
             v2.VDivider(vertical=True, classes="mx-2")
             with v2.VTooltip(bottom=True):
                 with html.Template(v_slot_activator="{ on, attrs }"):

quickview/view_manager.py

@@ -11,7 +11,6 @@
     GetColorTransferFunction,
     AddCameraLink,
     Render,
-    GetActiveView,
 )
 
 from quickview.pipeline import EAMVisSource
@@ -218,6 +217,7 @@ def update_views_for_timestep(self):
             return
         data = sm.Fetch(self.source.views["atmosphere_data"])
 
+        first_view = None
         for var, context in self.registry.items():
             varavg = self.compute_average(var, vtkdata=data)
             # Directly set average in trame state
@@ -233,8 +233,12 @@ def update_views_for_timestep(self):
             self.sync_color_config_to_state(context.index, context)
             self.generate_colorbar_image(context.index)
 
-            view = GetActiveView()
-            view.ResetCamera(True, 0.9)
+            # Track the first view for camera fitting
+            if first_view is None and context.state.view_proxy:
+                first_view = context.state.view_proxy
+
+        if first_view is not None:
+            first_view.ResetCamera(True, 0.9)
 
     def refresh_view_display(self, context: ViewContext):
         if not context.config.override_range:

src-tauri/Cargo.toml

@@ -1,6 +1,6 @@
 [package]
 name = "app"
-version = "0.1.18"
+version = "0.1.19"
 description = "QuickView: Visual Analyis for E3SM Atmosphere Data"
 authors = ["Kitware"]
 license = ""

src-tauri/tauri.conf.json

@@ -7,7 +7,7 @@
   },
   "package": {
     "productName": "QuickView",
-    "version": "0.1.18"
+    "version": "0.1.19"
   },
   "tauri": {
     "allowlist": {