make html

unravel/docs/_build/html/_sources/guide.md.txt

@@ -1152,7 +1152,7 @@ seg_copy_tifs -i <rel_path/raw_image> -s 0100 0500 1000 [-td ilastik_segmentatio
 # The name of the dir with full-res tifs can be passed in for -i
 ```
 
-### **2) [Train Ilastik](https://b-heifets.github.io/UNRAVEL/guide.html#training-ilastik) to segment c-Fos+ cells or other features**
+### 2) [Train Ilastik](https://b-heifets.github.io/UNRAVEL/guide.html#training-ilastik) to segment c-Fos+ cells or other features
 
 ### 3) `seg_ilastik`
 {py:mod}`unravel.segment.ilastik_pixel_classification`

unravel/docs/_build/html/guide.html

@@ -1723,7 +1723,7 @@ <h3>1) <code class="docutils literal notranslate"><span class="pre">seg_copy_tif
 </div>
 </section>
 <section id="train-ilastik-to-segment-c-fos-cells-or-other-features">
-<h3><strong>2) <a class="reference external" href="https://b-heifets.github.io/UNRAVEL/guide.html#training-ilastik">Train Ilastik</a> to segment c-Fos+ cells or other features</strong><a class="headerlink" href="#train-ilastik-to-segment-c-fos-cells-or-other-features" title="Link to this heading">#</a></h3>
+<h3>2) <a class="reference external" href="https://b-heifets.github.io/UNRAVEL/guide.html#training-ilastik">Train Ilastik</a> to segment c-Fos+ cells or other features<a class="headerlink" href="#train-ilastik-to-segment-c-fos-cells-or-other-features" title="Link to this heading">#</a></h3>
 </section>
 <section id="seg-ilastik">
 <h3>3) <code class="docutils literal notranslate"><span class="pre">seg_ilastik</span></code><a class="headerlink" href="#seg-ilastik" title="Link to this heading">#</a></h3>
@@ -2140,7 +2140,7 @@ <h2>Example Experiment Folder Structure<a class="headerlink" href="#example-expe
 </li>
 <li class="toc-h2 nav-item toc-entry"><a class="reference internal nav-link" href="#segmentation-of-full-resolution-fluorescence-images">Segmentation of Full-Resolution Fluorescence Images</a><ul class="nav section-nav flex-column">
 <li class="toc-h3 nav-item toc-entry"><a class="reference internal nav-link" href="#id1">1) <code class="docutils literal notranslate"><span class="pre">seg_copy_tifs</span></code></a></li>
-<li class="toc-h3 nav-item toc-entry"><a class="reference internal nav-link" href="#train-ilastik-to-segment-c-fos-cells-or-other-features"><strong>2) Train Ilastik to segment c-Fos+ cells or other features</strong></a></li>
+<li class="toc-h3 nav-item toc-entry"><a class="reference internal nav-link" href="#train-ilastik-to-segment-c-fos-cells-or-other-features">2) Train Ilastik to segment c-Fos+ cells or other features</a></li>
 <li class="toc-h3 nav-item toc-entry"><a class="reference internal nav-link" href="#seg-ilastik">3) <code class="docutils literal notranslate"><span class="pre">seg_ilastik</span></code></a></li>
 </ul>
 </li>

unravel/docs/_build/html/index.html

@@ -506,7 +506,7 @@ <h2>Support is welcome for<a class="headerlink" href="#support-is-welcome-for" t
 </li>
 <li class="toctree-l2"><a class="reference internal" href="guide.html#segmentation-of-full-resolution-fluorescence-images">Segmentation of Full-Resolution Fluorescence Images</a><ul>
 <li class="toctree-l3"><a class="reference internal" href="guide.html#id1">1) <code class="docutils literal notranslate"><span class="pre">seg_copy_tifs</span></code></a></li>
-<li class="toctree-l3"><a class="reference internal" href="guide.html#train-ilastik-to-segment-c-fos-cells-or-other-features"><strong>2) Train Ilastik to segment c-Fos+ cells or other features</strong></a></li>
+<li class="toctree-l3"><a class="reference internal" href="guide.html#train-ilastik-to-segment-c-fos-cells-or-other-features">2) Train Ilastik to segment c-Fos+ cells or other features</a></li>
 <li class="toctree-l3"><a class="reference internal" href="guide.html#seg-ilastik">3) <code class="docutils literal notranslate"><span class="pre">seg_ilastik</span></code></a></li>
 </ul>
 </li>