Merge pull request #72 from bcbio/eberdan-patch-5

Update FA.R
bcbio · Jan 23, 2025 · 9860103 · 9860103
2 parents 43374a9 + b73a6ed
commit 9860103
Showing 1 changed file with 1 addition and 2 deletions.
diff --git a/inst/templates/rnaseq/00_libs/FA.R b/inst/templates/rnaseq/00_libs/FA.R
@@ -14,8 +14,7 @@ get_databases_v2=function(sps="human"){
                          "m5.go.mf.v2024.1.Mm.entrez.gmt",
                          "m5.go.cc.v2024.1.Mm.entrez.gmt",
                          "m5.go.bp.v2024.1.Mm.entrez.gmt",
-                         "m2.cp.reactome.v2024.1.Mm.entrez.gmt",
-                         "m2.cp.kegg_legacy.v2024.1.Mm.entrez.gmt"))
+                         "m2.cp.reactome.v2024.1.Mm.entrez.gmt"))
   all_in_life=lapply(gmt.files[[sps]], function(gmt){
     df=read.gmt(file.path(source,sps,gmt))
     names(df)=c("gs_name", "entrez_gene")