Skip to content
@biocore

biocore

Collaboratively developed bioinformatics software.

Pinned Loading

  1. gneiss gneiss Public

    compositional data analysis toolbox

    Jupyter Notebook 60 27

Repositories

Showing 10 of 92 repositories
  • microsetta-admin Public
    biocore/microsetta-admin’s past year of commit activity
    Python 0 BSD-3-Clause 10 16 4 Updated Mar 2, 2026
  • pysyndna Public

    Python implementation and extension of SynDNA ("a Synthetic DNA Spike-in Method for Absolute Quantification of Shotgun Metagenomic Sequencing", Zaramela et al., mSystems 2022

    biocore/pysyndna’s past year of commit activity
    Python 0 0 0 0 Updated Feb 28, 2026
  • q2-birdman Public Forked from ahdilmore/MARS_Birdman

    Outlines for running birdman

    biocore/q2-birdman’s past year of commit activity
    Python 2 BSD-3-Clause 4 0 0 Updated Feb 26, 2026
  • kl-metapool Public

    Jupyter notebooks to assist with sample processing

    biocore/kl-metapool’s past year of commit activity
    Python 9 MIT 20 58 (2 issues need help) 3 Updated Feb 24, 2026
  • microsetta-interface Public

    The Microsetta participant facing user interface

    biocore/microsetta-interface’s past year of commit activity
    Jinja 1 BSD-3-Clause 17 44 4 Updated Jan 21, 2026
  • microsetta-private-api Public

    A private microservice to support The Microsetta Initiative

    biocore/microsetta-private-api’s past year of commit activity
    Python 6 BSD-3-Clause 19 63 0 Updated Jan 21, 2026
  • q2-katharoseq Public
    biocore/q2-katharoseq’s past year of commit activity
    Python 1 BSD-3-Clause 5 1 3 Updated Jan 16, 2026
  • emperor Public

    Emperor a tool for the analysis and visualization of large microbial ecology datasets

    biocore/emperor’s past year of commit activity
    JavaScript 54 49 63 1 Updated Jan 12, 2026
  • biom-format Public

    The Biological Observation Matrix (BIOM) Format Project

    biocore/biom-format’s past year of commit activity
    Python 97 93 26 3 Updated Dec 23, 2025
  • unifrac-binaries Public
    biocore/unifrac-binaries’s past year of commit activity
    C++ 2 BSD-3-Clause 9 4 0 Updated Dec 5, 2025
View all repositories

Top languages

Loading…

Most used topics

Loading…