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fixed stderr
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rnmitchell committed Dec 29, 2023
2 parents aa64bf1 + 9a6d057 commit de5f4b0
Showing 1 changed file with 2 additions and 3 deletions.
5 changes: 2 additions & 3 deletions lusSTR/wrappers/convert.py
Original file line number Diff line number Diff line change
Expand Up @@ -25,7 +25,6 @@
from lusSTR.scripts.repeat import reverse_complement, reverse_complement_bracketed
from matplotlib.backends.backend_pdf import PdfPages
from pathlib import Path
import sys


with open(get_str_metadata_file(), "r") as fh:
Expand Down Expand Up @@ -110,9 +109,9 @@ def format_table(input, uas=False, kit="forenseq"):
if check_sr > 10:
msg = (
"Multiple microvariants identified at D12 locus. "
"Please check STRait Razor version!!\n"
"Please check STRait Razor version!!"
)
sys.stderr.write(msg)
print(msg)
summary = [sampleid, project, analysis, locus] + marker.summary + [reads]
list_of_lists.append(summary)

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