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removed unnecessary argument
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rnmitchell committed Aug 20, 2024
1 parent 39754f7 commit f36e5f7
Showing 1 changed file with 2 additions and 2 deletions.
4 changes: 2 additions & 2 deletions lusSTR/wrappers/filter.py
Original file line number Diff line number Diff line change
Expand Up @@ -90,7 +90,7 @@ def get_filter_metadata_file():
filter_marker_data = json.load(fh)


def process_strs(dict_loc, datatype, seq_col, brack_col, sex):
def process_strs(dict_loc, datatype, seq_col, brack_col):
final_df = pd.DataFrame()
flags_df = pd.DataFrame()
for key, value in dict_loc.items():
Expand Down Expand Up @@ -477,7 +477,7 @@ def process_input(
STRmix_output(full_df, outpath, profile_type, data_type, seq_col)
else:
dict_loc = {k: v for k, v in full_df.groupby(["SampleID", "Locus"])}
final_df, flags_df = process_strs(dict_loc, data_type, seq_col, brack_col, sex)
final_df, flags_df = process_strs(dict_loc, data_type, seq_col, brack_col)
if final_df is not None:
marker_plots(final_df, input_name, sex)
if output_type == "efm" or output_type == "mpsproto":
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